Escherichia coli S30 |
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Putative Escherichia coli S30 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
| Sequence length: | GenBank #: | |
| Chromosome: | 4,664,102 bp | CP010231 |
| plasmid B: | 136,060 bp | CP010233 |
| plasmid C: | 117,266 bp | CP010234 |
REBASE acronym: EcoS30
Org_num: 21968
All begin RG68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6325 | metal-dependent hydrolase | |||
| 6330 | R | Eco9036IP (100% identity) | EcoS30ORF6345P | |
| 6335 | 227 aa hypothetical protein | |||
| 6340 | S | S.Eco9036I (100% identity) | S.EcoS30ORF6345P | |
| 6345 | M | M.Eco9036I (100% identity) | M.EcoS30ORF6345P | |
| 6350 | 388 aa hypothetical protein | |||
| 18660 | addiction module antitoxin | |||
| 18665 | M | M.SenS0935ORF770P (99% identity) | M.EcoS30ORF18665P | |
| 18670 | S | S.Ecos53ORF20340P (100% identity) | S.EcoS30ORF18665P | |
| 18675 | R | Ecos53ORF20340P (100% identity) | EcoS30ORF18665P | |
| 18680 | membrane protein | |||
| plasmid C | ||||
| 24840 | antitoxin | |||
| 24845 | M | Type I restriction-modification system, DNA-methyltransferase subunit M | M.EcoS30ORF24845P | |
| 24850 | S | S.KpnN11aORF30P (18% identity) | S1.EcoS30ORF24845P | |
| 24855 | pseudogene | |||
| 24860 | S | S.EcosS142ORF43560P (60% identity) | S2.EcoS30ORF24845P | |
| 24865 | R | EcoPSS12ORF44870P (100% identity) | EcoS30ORF24845P | |
| 24870 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2380 | P21 prophage-derived protein NinB | |||
| 2385 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoS30ORF2385P |
| 2390 | protein ninE | |||
| 6650 | multidrug DMT transporter | |||
| 6655 | V | V.SflSTLE3DcmP (100% identity) | V.EcoS30DcmP | |
| 6660 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoS30DcmP |
| 6665 | HD domain protein | |||
| 13330 | Fis family transcriptional regulator | |||
| 13335 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoS30ORF13335P |
| 13340 | 59 aa hypothetical protein | |||
| 13980 | ribulose-phosphate 3-epimerase | |||
| 13985 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS30DamP |
| 13990 | cell division protein DamX | |||
| 19340 | 162 aa hypothetical protein | |||
| 19345 | M | M.EcoR3ORF14415P (100% identity) | GATC | M.EcoS30ORF19345P |
| 19350 | LexA family transcriptional regulator | |||
| 19375 | phage protein | |||
| 19380 | M | M.Sso63633ORF22290P (100% identity) | M.EcoS30ORF19380P | |
| 19385 | holin | |||
| plasmid B | ||||
| 24700 | 73 aa hypothetical protein | |||
| 24705 | M | M.StyR64ORFAP (100% identity) | M.EcoS30ORF24705P | |
| 24710 | 103 aa hypothetical protein | |||
| plasmid C | ||||
| 25035 | XRE family transcriptional regulator | |||
| 25040 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoS30ORF25040P |
| 25045 | pseudogene | |||
| 25185 | DNA repair protein | |||
| 25190 | RM | EcoS081ORF45380P (100% identity) | EcoS30ORF25190P | |
| 25195 | ABC transporter ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2570 | pseudogene | |||
| 2575 | R | EcoUKMcrBP (100% identity) | EcoS30McrBP | |
| 2580 | R | EmaE2C08McrCP (100% identity) | EcoS30McrCP | |
| 2585 | anti-adapter protein IraM | |||