Escherichia coli M6 |
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Putative Escherichia coli M6 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 5,146,228 bp
GenBank #: CP010186
REBASE acronym: EcoM6
Org_num: 21951
All begin RG56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9675 | metal-dependent hydrolase | |||
| 9680 | R | EcoM9ORF9685P (100% identity) | EcoM6ORF9695P | |
| 9685 | 227 aa hypothetical protein | |||
| ??? | S | S.EcoM9ORF9685P (100% identity) | S.EcoM6ORF9695P | |
| 9695 | M | M.EcoSTEC346ORFGP (100% identity) | M.EcoM6ORF9695P | |
| 9700 | 388 aa hypothetical protein | |||
| 23375 | membrane protein | |||
| 23380 | S | S.SflN101ORF11895P (70% identity) | S1.EcoM6ORF23400P | |
| 23385 | transposase | |||
| 23390 | transposase | |||
| 23395 | S | S.EcoWORF4661P (29% identity) | S2.EcoM6ORF23400P | |
| 23400 | M | M.EcohubtORF19935P (100% identity) | M.EcoM6ORF23400P | |
| 23405 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4575 | P21 prophage-derived protein NinB | |||
| 4580 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoM6ORF4580P |
| 4585 | protein ninE | |||
| 10020 | multidrug DMT transporter | |||
| 10025 | V | V.SsoSE61DcmP (100% identity) | V.EcoM6DcmP | |
| 10030 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoM6DcmP |
| 10035 | hydrolase | |||
| 12015 | Mu prophage protein Com | |||
| 12020 | M | M.EcoM9ORF12010P (100% identity) | M.EcoM6ORF12020P | |
| 12025 | flagella biosynthesis regulator | |||
| 17525 | Fis family transcriptional regulator | |||
| 17530 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoM6ORF17530P |
| 17535 | 59 aa hypothetical protein | |||
| 18100 | ribulose-phosphate 3-epimerase | |||
| 18105 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoM6DamP |
| 18110 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23405 | 128 aa hypothetical protein | |||
| 23410 | R | EcoM9McrCP (100% identity) | EcoM6McrCP | |
| 23415 | R | SflN101McrBP (100% identity) | EcoM6McrBP | |
| 23420 | restriction endonuclease | |||