Escherichia coli H8 |
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Putative Escherichia coli H8 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
| Sequence length: | GenBank #: | |
| Chromosome: | 4,929,892 bp | CP010172 |
| plasmid A: | 94,395 bp | CP010173 |
| plasmid B: | 106,274 bp | CP010174 |
REBASE acronym: EcoH8
Org_num: 21945
All begin RG50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9530 | transposase | |||
| 9535 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoH8ORF9540P |
| 9540 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoH8ORF9540P |
| 9545 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoH8ORF9540P |
| 9550 | 540 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 405 | holin | |||
| 410 | M | M.Sso63633ORF22290P (100% identity) | M.EcoH8ORF410P | |
| 415 | TrmB family transcriptional regulator | |||
| 7230 | cell division protein DamX | |||
| 7235 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH8DamP |
| 7240 | ribulose-phosphate 3-epimerase | |||
| 7870 | 59 aa hypothetical protein | |||
| 7875 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoH8ORF7875P |
| 7880 | Fis family transcriptional regulator | |||
| 15130 | DEAD/DEAH box helicase | |||
| 15135 | RM | SflLIN17ORF3140P (100% identity) | EcoH8ORF15135P | |
| 15140 | Transposase | |||
| 23945 | multidrug DMT transporter | |||
| 23950 | V | V.SflSTLE3DcmP (100% identity) | V.EcoH8DcmP | |
| 23955 | M | M.Ecoppa8DcmP (100% identity) | CCWGG | M.EcoH8DcmP |
| 23960 | HD domain protein | |||
| plasmid A | ||||
| 24480 | DNA recombinase | |||
| 24485 | M | M.EcoF1140ORF49830P (100% identity) | M.EcoH8ORF24485P | |
| 24500 | 93 aa hypothetical protein | |||
| plasmid B | ||||
| 25145 | 97 aa hypothetical protein | |||
| 25150 | M | M.Xca80ORFEP (100% identity) | M.EcoH8ORF25150P | |
| 25155 | 73 aa hypothetical protein | |||