Escherichia coli 350 |
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Putative Escherichia coli 350 RM systems
Ref: Shaaban,S. et al. unpublished
REBASE ref # 23582
| Sequence length: | GenBank #: | |
| Chromosome: | 5,411,823 bp | CP018243 |
| plasmid pO157: | 92,522 bp | CP018244 |
REBASE acronym: Eco350
Org_num: 21915
All begin BFL21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5450 | metal-dependent hydrolase | |||
| 5455 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | Eco350ORF5475P |
| 5460 | Appr-1-p processing protein | |||
| 5465 | 218 aa hypothetical protein | |||
| 5470 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco350ORF5475P |
| 5475 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco350ORF5475P |
| 5480 | transcription factor | |||
| 28885 | 113 aa hypothetical protein | |||
| 28890 | S | S.Ecos1613ORF27060P (100% identity) | S.Eco350ORF28895P | |
| 28895 | M | M.EcosPA8ORF17615P (100% identity) | M.Eco350ORF28895P | |
| 28900 | R | Ecos1613ORF27060P (100% identity) | Eco350ORF28895P | |
| 28905 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13680 | drug/metabolite exporter YedA | |||
| 13685 | V | V.EcosPA8DcmP (100% identity) | V.Eco350DcmP | |
| 13690 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco350DcmP |
| 13695 | phosphohydrolase | |||
| 22300 | Fis family transcriptional regulator | |||
| 22305 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco350ORF22305P |
| 22310 | DUF2556 domain-containing protein | |||
| 22855 | ribulose-phosphate 3-epimerase | |||
| 22860 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco350DamP |
| 22865 | cell division protein DamX | |||
| 27170 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco350ORF27175P | |
| 27185 | Eae protein | |||
| 28605 | helicase | |||
| 28610 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco350ORF28610P |
| plasmid pO157 | ||||
| 29425 | arginase | |||
| 29430 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco350ORF29430P | |
| 29435 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 28875 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco350GmrDP | |
| 28885 | 113 aa hypothetical protein | |||