Escherichia coli NCTC86 |
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Putative Escherichia coli NCTC86 RM systems
Ref: Khetrapal,V. et al. unpublished
REBASE ref # 23958
Complete sequence: 5,111,920 bp
GenBank #: CP019778
REBASE acronym: Eco86
Org_num: 16605
All begin B0915_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5695 | metal-dependent hydrolase | |||
| 5700 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco86ORF5720P |
| 5705 | Appr-1-p processing protein | |||
| 5710 | 218 aa hypothetical protein | |||
| 5715 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco86ORF5720P |
| 5720 | M | M.EcosB2CORFEP (99% identity) | GAGNNNNNGTTY | M.Eco86ORF5720P |
| 5725 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1425 | integrase | |||
| 1430 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco86I |
| 1435 | 568 aa hypothetical protein | |||
| 8345 | TrmB family transcriptional regulator | |||
| 8350 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco86ORF8350P |
| 8365 | DUF3927 domain-containing protein | |||
| 12150 | drug/metabolite exporter YedA | |||
| ??? | V | V.SflN116DcmP (100% identity) | CCWGG | V.Eco86DcmP |
| 12160 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco86Dcm |
| 12165 | phosphohydrolase | |||
| 19690 | Fis family transcriptional regulator | |||
| 19695 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco86ORF19695P |
| 19700 | transporter | |||
| 20350 | ribulose-phosphate 3-epimerase | |||
| 20355 | M | M.SsoST152DamP (100% identity) | GATC | M.Eco86Dam |
| 20360 | protein DamX | |||
| 25810 | histidine kinase | |||
| 25815 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco86III |
| 25820 | 198 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26290 | ATP-dependent helicase | |||
| 26295 | M | M.Ecos19ORF20250P (100% identity) | GAGCC | M.Eco86II |
| 26300 | R | Ecos19ORF20250P (100% identity) | GAGCC | Eco86IIP |
| 26305 | 100 aa hypothetical protein | |||