Escherichia coli GN1226 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli GN1226 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,298,081 bp
GenBank #: LXIS00000000 (NZ_LXIS00000000)
REBASE acronym: Eco1226
Org_num: 21422
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 713 | 82 aa hypothetical protein | |||
| 714 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1226ORFCP |
| 717 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1226ORFCP |
| 719 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1226ORFCP |
| 721 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | 61 aa hypothetical protein | |||
| 2 | M | M.EcoTWORF1742P (100% identity) | M.Eco1226ORFIP | |
| 5 | ARAC-type regulatory protein, partial | |||
| 8 | 66 aa hypothetical protein BY68_22700 | |||
| 9 | M | M.EcoB242ORF15690P (100% identity) | M.Eco1226ORFHP | |
| 12 | 116 aa hypothetical protein ACU67_25215 | |||
| 18 | 65 aa hypothetical protein | |||
| 19 | R | Sso1099IP (100% identity) | CTGCAG | Eco1226ORFGP |
| 20 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.Eco1226ORFGP |
| 22 | 95 aa hypothetical protein AU083_gp23 | |||
| 13 | 101 aa hypothetical protein | |||
| 15 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1226ORFEP | |
| 18 | 73 aa hypothetical protein | |||
| 32 | Eae protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1226ORFAP | |
| 39 | 90 aa hypothetical protein | |||
| 40 | NinB | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1226ORFFP |
| 48 | 64 aa hypothetical protein | |||
| 27 | membrane protein | |||
| 28 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1226ORFDP |
| 29 | Fis family transcriptional regulator | |||
| 31 | phosphohydrolase | |||
| 32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1226DcmP |
| 34 | V | V.EcoPT54DcmP (100% identity) | V.Eco1226DcmP | |
| 38 | drug/metabolite exporter YedA | |||
| 107 | ribulose-phosphate 3-epimerase | |||
| 108 | M | DamMyc-Pc | GATC | M.Eco1226DamP |
| 111 | cell division protein DamX | |||
| 841 | 138 aa hypothetical protein | |||
| 842 | RM | Eco1224ORFCP (100% identity) | GAAABCC | Eco1226ORFBP |
| 850 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 724 | 81 aa hypothetical protein Ec53638_1442 | |||
| 725 | R | EcoX21GmrDP (100% identity) | Eco1226GmrDP | |
| 726 | 293 aa hypothetical protein | |||