Escherichia coli GN1222 |
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Putative Escherichia coli GN1222 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,334,541 bp
GenBank #: LXIW00000000 (NZ_LXIW00000000)
REBASE acronym: Eco1222
Org_num: 21511
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 186 | metal-dependent hydrolase | |||
| 189 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | Eco1222ORFDP |
| 193 | 99 aa hypothetical protein | |||
| 194 | Appr-1-p processing protein | |||
| 195 | 218 aa hypothetical protein | |||
| 196 | 72 aa hypothetical protein | |||
| 197 | 174 aa hypothetical protein | |||
| 198 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco1222ORFDP |
| 199 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco1222ORFDP |
| 206 | 63 aa hypothetical protein | |||
| 185 | 82 aa hypothetical protein | |||
| 186 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1222ORFCP |
| 189 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1222ORFCP |
| 191 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1222ORFCP |
| 193 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 116 aa hypothetical protein ACU67_25215 | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1222ORFHP | |
| 11 | 66 aa hypothetical protein BY68_22700 | |||
| 17 | 64 aa hypothetical protein | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1222ORFGP |
| 23 | NinB | |||
| 27 | membrane protein | |||
| 28 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1222ORFAP |
| 29 | Fis family transcriptional regulator | |||
| 128 | 73 aa hypothetical protein | |||
| 130 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1222ORFFP | |
| 133 | 101 aa hypothetical protein | |||
| 138 | drug/metabolite exporter YedA | |||
| 140 | V | V.EcoPT54DcmP (100% identity) | V.Eco1222DcmP | |
| 143 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1222DcmP |
| 145 | phosphohydrolase | |||
| 146 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1222ORFEP | |
| 153 | 116 aa hypothetical protein | |||
| 313 | 138 aa hypothetical protein | |||
| 314 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1222ORFBP |
| 322 | helicase | |||
| 482 | cell division protein DamX | |||
| 485 | M | DamMyc-Pc | GATC | M.Eco1222DamP |
| 487 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 196 | 81 aa hypothetical protein Ec53638_1442 | |||
| 197 | R | EcoX21GmrDP (100% identity) | Eco1222GmrDP | |
| 198 | 293 aa hypothetical protein | |||