Escherichia coli GN1219 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli GN1219 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,428,555 bp
GenBank #: LXIZ00000000 (NZ_LXIZ00000000)
REBASE acronym: Eco1219
Org_num: 21513
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 149 | 113 aa hypothetical protein | |||
| 152 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1219ORFAP |
| 154 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1219ORFAP |
| 156 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1219ORFAP |
| 159 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 104 aa unknown protein encoded by prophage CP-933O | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1219ORFIP | |
| 11 | 106 aa hypothetical protein BY68_22700 | |||
| 3 | ARAC-type regulatory protein, partial | |||
| 5 | M | M.EcoTWORF1742P (100% identity) | M.Eco1219ORFJP | |
| 8 | 91 aa hypothetical protein | |||
| 22 | 95 aa hypothetical protein phi191_00023 | |||
| 23 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco1219ORFHP |
| 25 | R | Sso1099IP (100% identity) | CTGCAG | Eco1219ORFHP |
| 26 | 65 aa hypothetical protein | |||
| 48 | NinB | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1219ORFFP |
| 56 | 64 aa hypothetical protein | |||
| 42 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1219ORFGP | |
| 49 | 116 aa hypothetical protein | |||
| 20 | helicase | |||
| ??? | RM | EcosPA8ORF17390P (98% identity) | GAAABCC | Eco1219ORFBP |
| 32 | 138 aa hypothetical protein | |||
| 114 | ribulose-phosphate 3-epimerase | |||
| 115 | M | DamMyc-Pc | GATC | M.Eco1219DamP |
| 118 | cell division protein DamX | |||
| 269 | 73 aa hypothetical protein | |||
| 271 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1219ORFEP | |
| 274 | 101 aa hypothetical protein | |||
| 378 | drug/metabolite exporter YedA | |||
| 380 | V | V.EcoPT54DcmP (100% identity) | V.Eco1219DcmP | |
| 383 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1219DcmP |
| 385 | phosphohydrolase | |||
| 641 | 128 aa hypothetical protein | |||
| 644 | M | M.Eco194195ORFBP (100% identity) | GATC | M.Eco1219ORFDP |
| 648 | 149 aa hypothetical protein | |||
| 729 | Fis family transcriptional regulator | |||
| 730 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1219ORFCP |
| 731 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 146 | 293 aa hypothetical protein | |||
| 147 | R | EcoX21GmrDP (100% identity) | Eco1219GmrDP | |
| 148 | 81 aa hypothetical protein Ec53638_1442 | |||