Escherichia coli GN1216 |
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Putative Escherichia coli GN1216 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,378,586 bp
GenBank #: LXJC00000000 (NZ_LXJC00000000)
REBASE acronym: Eco1216
Org_num: 21432
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 184 | 113 aa hypothetical protein | |||
| 187 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1216ORFCP |
| 189 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1216ORFCP |
| 191 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1216ORFCP |
| 194 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | 116 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1216ORFAP | |
| 16 | 90 aa hypothetical protein | |||
| 12 | 101 aa hypothetical protein | |||
| 14 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1216ORFFP | |
| 17 | 73 aa hypothetical protein | |||
| 45 | 66 aa hypothetical protein BY68_22700 | |||
| 46 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1216ORFGP | |
| 49 | 146 aa unknown protein encoded by prophage CP-933O | |||
| 56 | helicase | |||
| 58 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1216ORFDP |
| 67 | 138 aa hypothetical protein | |||
| 111 | ribulose-phosphate 3-epimerase | |||
| 112 | M | DamMyc-Pc | GATC | M.Eco1216DamP |
| 115 | cell division protein DamX | |||
| 138 | drug/metabolite exporter YedA | |||
| 140 | V | V.EcoPT54DcmP (100% identity) | V.Eco1216DcmP | |
| 143 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1216DcmP |
| 145 | phosphohydrolase | |||
| 730 | Fis family transcriptional regulator | |||
| 731 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1216ORFEP |
| 732 | membrane protein | |||
| 1563 | 134 aa hypothetical protein | |||
| 1566 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1216ORFBP |
| 1570 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 181 | 293 aa hypothetical protein | |||
| 182 | R | EcoX21GmrDP (100% identity) | Eco1216GmrDP | |
| 183 | 81 aa hypothetical protein Ec53638_1442 | |||