Escherichia coli GN1215 |
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Putative Escherichia coli GN1215 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,427,772 bp
GenBank #: LXJD00000000 (NZ_LXJD00000000)
REBASE acronym: Eco1215
Org_num: 21514
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 167 | 113 aa hypothetical protein | |||
| 170 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1215ORFAP |
| 172 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1215ORFAP |
| 174 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1215ORFAP |
| 177 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17 | 76 aa hypothetical protein | |||
| 20 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1215ORFGP |
| 24 | 137 aa hypothetical protein | |||
| 50 | 66 aa hypothetical protein BY68_22700 | |||
| 51 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1215ORFFP | |
| 54 | 146 aa unknown protein encoded by prophage CP-933O | |||
| 24 | membrane protein | |||
| 25 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1215ORFCP |
| 26 | Fis family transcriptional regulator | |||
| 74 | 73 aa hypothetical protein | |||
| 76 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1215ORFEP | |
| 79 | 101 aa hypothetical protein | |||
| 69 | drug/metabolite exporter YedA | |||
| 71 | V | V.EcoPT54DcmP (100% identity) | V.Eco1215DcmP | |
| 74 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1215DcmP |
| 76 | phosphohydrolase | |||
| 38 | helicase | |||
| 40 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1215ORFBP |
| 49 | 138 aa hypothetical protein | |||
| 142 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1215ORFDP | |
| 149 | 116 aa hypothetical protein | |||
| 683 | cell division protein DamX | |||
| 686 | M | DamMyc-Pc | GATC | M.Eco1215DamP |
| 688 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 164 | 293 aa hypothetical protein | |||
| 165 | R | EcoX21GmrDP (100% identity) | Eco1215GmrDP | |
| 166 | 81 aa hypothetical protein Ec53638_1442 | |||