Escherichia coli GN1213 |
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Putative Escherichia coli GN1213 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,349,462 bp
GenBank #: LXJF00000000 (NZ_LXJF00000000)
REBASE acronym: Eco1213
Org_num: 21515
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 167 | 113 aa hypothetical protein | |||
| 170 | S | S.Eco1227ORFAP (100% identity) | CACNNNNNNNCTGG | S.Eco1213ORFAP |
| 172 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1213ORFAP |
| 174 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1213ORFAP |
| 177 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 146 aa unknown protein encoded by prophage CP-933O | |||
| 4 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1213ORFGP | |
| 7 | 66 aa hypothetical protein BY68_22700 | |||
| 12 | 101 aa hypothetical protein | |||
| 14 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1213ORFFP | |
| 17 | 73 aa hypothetical protein | |||
| 23 | 76 aa hypothetical protein | |||
| 26 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1213ORFDP |
| 30 | 128 aa hypothetical protein | |||
| 15 | phosphohydrolase | |||
| 16 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1213DcmP |
| 18 | V | V.EcoPT54DcmP (100% identity) | V.Eco1213DcmP | |
| 22 | drug/metabolite exporter YedA | |||
| 27 | membrane protein | |||
| 28 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1213ORFCP |
| 29 | Fis family transcriptional regulator | |||
| 38 | helicase | |||
| 40 | RM | EcosPA8ORF17390P (99% identity) | GAAABCC | Eco1213ORFBP |
| 49 | 138 aa hypothetical protein | |||
| 145 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1213ORFEP | |
| 152 | 116 aa hypothetical protein | |||
| 684 | cell division protein DamX | |||
| 687 | M | DamMyc-Pc | GATC | M.Eco1213DamP |
| 689 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 164 | 293 aa hypothetical protein | |||
| 165 | R | EcoX21GmrDP (100% identity) | Eco1213GmrDP | |
| 166 | 81 aa hypothetical protein Ec53638_1442 | |||