Escherichia coli GN1212 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli GN1212 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,320,284 bp
GenBank #: LXJG00000000 (NZ_LXJG00000000)
REBASE acronym: Eco1212
Org_num: 21441
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1493 | 82 aa hypothetical protein | |||
| 1494 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1212ORFCP |
| 1497 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1212ORFCP |
| 1499 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1212ORFCP |
| 1501 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | NinB | |||
| ??? | M | hypothetical protein | GATC | M.Eco1212ORFBP |
| 15 | 64 aa hypothetical protein | |||
| 12 | 92 aa hypothetical protein | |||
| ??? | M | hypothetical protein | GATC | M.Eco1212ORFAP |
| 19 | endonuclease | |||
| 48 | 66 aa hypothetical protein BY68_22700 | |||
| 49 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1212ORFIP | |
| 52 | 146 aa unknown protein encoded by prophage CP-933O | |||
| 31 | phosphohydrolase | |||
| 32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1212DcmP |
| 34 | V | V.EcoPT54DcmP (100% identity) | V.Eco1212DcmP | |
| 38 | drug/metabolite exporter YedA | |||
| 40 | 125 aa hypothetical protein | |||
| 43 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1212ORFHP |
| 47 | 76 aa hypothetical protein | |||
| 111 | ribulose-phosphate 3-epimerase | |||
| 112 | M | DamMyc-Pc | GATC | M.Eco1212DamP |
| 115 | cell division protein DamX | |||
| 162 | 73 aa hypothetical protein | |||
| 164 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1212ORFGP | |
| 167 | 101 aa hypothetical protein | |||
| 142 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1212ORFFP | |
| 149 | 116 aa hypothetical protein | |||
| 738 | Fis family transcriptional regulator | |||
| 739 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1212ORFEP |
| 740 | membrane protein | |||
| 1621 | 138 aa hypothetical protein | |||
| 1622 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1212ORFDP |
| 1630 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1504 | 81 aa hypothetical protein Ec53638_1442 | |||
| 1505 | R | EcoX21GmrDP (100% identity) | Eco1212GmrDP | |
| 1506 | 293 aa hypothetical protein | |||