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Putative Prevotella intermedia 17F RM systems
Ref: Johnston,C.D. and Rittling,S.R. unpublished
REBASE ref # 25088
Sequence length: | GenBank #: | |
chromosome I: | 2,119,682 bp | CP019302 |
chromosome II: | 616,633 bp | CP019303 |
REBASE acronym: Pin17F
Org_num: 18211
All begin BWX40_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
935 | zinc metalloprotease | |||
940 | R | Pin17ORF476P (100% identity) | GAGNNNNNNTGG | Pin17FIVP |
945 | M | M.Pin17ORF476P (97% identity) | GAGNNNNNNTGG | M.Pin17FIV |
950 | 339 aa hypothetical protein | |||
955 | S | S.Pin172ORF283P (100% identity) | GAGNNNNNNTGG | S.Pin17FIV |
960 | 92 aa hypothetical protein | |||
chromosome II | ||||
12050 | site-specific integrase | |||
12055 | S | S1.Pin172ORF2481P (52% identity) | GAGNNNNNNTTA | S.Pin17FORF12055P |
12060 | 0 aa hypothetical protein | |||
12060 | 0 aa hypothetical protein | |||
12065 | S | S2.Pin17ORF406P (100% identity) | GAGNNNNNNTTA | S.Pin17FV |
12070 | cell filamentation protein Fic | |||
12075 | M | M.Pin17ORF406P (100% identity) | GAGNNNNNNTTA | M.Pin17FV |
12080 | 567 aa hypothetical protein | |||
12085 | R | Pin17ORF406P (100% identity) | GAGNNNNNNTTA | Pin17FVP |
??? | C | C.PinWW414ORF5835P (100% identity) | C.Pin17FVP | |
12095 | IS982 family transposase | |||
9480 | 79 aa hypothetical protein | |||
9485 | R | Pin17ORF406P (94% identity) | Pin17FORF9485P | |
9490 | IS982 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2970 | 80 aa hypothetical protein | |||
2975 | M | M.Pin2833ORF9525P (91% identity) | M.Pin17FORF2975P | |
2980 | thymidylate synthase | |||
chromosome II | ||||
9585 | SNF2/RAD54 family helicase | |||
9590 | RM | Pin172ORF2502P (98% identity) | GGYGAB | Pin17FIII |
??? | Eco57I restriction-modification methylase | |||
9590 | restriction endonuclease | |||
??? | RM | Pin17ORF429P (25% identity) | Pin17FORF9595P | |
9600 | invertase | |||
11105 | 1081 aa hypothetical protein | |||
11110 | R | Pin172ORF2280P (100% identity) | Pin17FORF11110P | |
11115 | oxidoreductase | |||
12185 | SNF2/RAD54 family helicase | |||
12190 | RM | Pin17ORF429P (91% identity) | Pin17FORF12190P | |
12195 | type II restriction endonuclease subunit M | |||
12190 | restriction endonuclease | |||
12195 | RM | Pin17FIII (20% identity) | Pin17FORF12195P | |
12200 | invertase |