Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033887 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033887 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,937,549 bp
GenBank #: LUJA00000000 (NZ_LUJA00000000)
REBASE acronym: Sen33887
Org_num: 21355
All begin AGR55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3135 | restriction endonuclease | |||
| 3140 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33887ORF3145P |
| 3145 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33887ORF3145P |
| 3150 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33887ORF3145P |
| 3155 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9720 | crossover junction endodeoxyribonuclease | |||
| 9725 | M | M.StyUK1V (100% identity) | GATC | M.Sen33887ORF9725P |
| 9730 | 160 aa hypothetical protein | |||
| 4915 | ribulose phosphate epimerase | |||
| 4920 | M | M.StyTDamP (100% identity) | GATC | M.Sen33887DamP |
| 4925 | cell division protein DamX | |||
| 22105 | 54 aa hypothetical protein | |||
| 22110 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33887ORF22110P |
| 22115 | Fis family transcriptional regulator | |||
| 19330 | 73 aa hypothetical protein | |||
| 19335 | M | M.StyUK1ORFAP (100% identity) | M.Sen33887ORF19335P | |
| 19340 | 62 aa hypothetical protein | |||
| 22445 | multidrug DMT transporter | |||
| 22450 | V | V.StyUK1DcmP (100% identity) | V.Sen33887DcmP | |
| 22455 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33887DcmP |
| 22460 | hydrolase | |||
| 18895 | 75 aa hypothetical protein | |||
| 18900 | M | M.SenZM9ORFAP (100% identity) | GATC | M.Sen33887ORF18900P |
| 18905 | endonuclease | |||
| 3305 | DNA repair protein | |||
| 3310 | RM | StyUK1IV (100% identity) | GATCAG | Sen33887ORF3310P |
| 3315 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8145 | 33 aa hypothetical protein | |||
| 8150 | R | StyUK1IP (99% identity) | CAGAG | Sen33887ORF8155P |
| 8155 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33887ORF8155P |
| 8160 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3130 | 95 aa hypothetical protein | |||
| 3135 | R | StyUK1MrrP (100% identity) | Sen33887MrrP | |
| 3140 | DEAD/DEAH box helicase | |||