Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033876 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033876 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,893,788 bp
GenBank #: LVGE00000000 (NZ_LVGE00000000)
REBASE acronym: Sen33876
Org_num: 21344
All begin AIZ21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4905 | restriction endonuclease | |||
| 4910 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33876ORF4915P |
| 4915 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33876ORF4915P |
| 4920 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33876ORF4915P |
| 4925 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6265 | ribulose phosphate epimerase | |||
| 6270 | M | M.StyTDamP (100% identity) | GATC | M.Sen33876DamP |
| 6275 | cell division protein DamX | |||
| 11185 | 55 aa hypothetical protein | |||
| 11190 | M | M.StypAKU1ORFCP (100% identity) | CCWGG | M.Sen33876ORF11190P |
| 11195 | nuclease | |||
| 21510 | 54 aa hypothetical protein | |||
| 21515 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33876ORF21515P |
| 21520 | Fis family transcriptional regulator | |||
| 17395 | 73 aa hypothetical protein | |||
| 17400 | M | M.StyUK1ORFAP (100% identity) | M.Sen33876ORF17400P | |
| 17405 | 62 aa hypothetical protein | |||
| 22040 | multidrug DMT transporter | |||
| 22045 | V | V.StyUK1DcmP (100% identity) | V.Sen33876DcmP | |
| 22050 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33876DcmP |
| 22055 | hydrolase | |||
| 16460 | 75 aa hypothetical protein | |||
| 16465 | M | M.SenZM9ORFAP (100% identity) | GATC | M.Sen33876ORF16465P |
| 16470 | endonuclease | |||
| 5075 | DNA repair protein | |||
| 5080 | RM | StyUK1IV (100% identity) | GATCAG | Sen33876ORF5080P |
| 5085 | 363 aa hypothetical protein | |||
| 9030 | 160 aa hypothetical protein | |||
| 9035 | M | M.StyUK1V (100% identity) | GATC | M.Sen33876ORF9035P |
| 9040 | crossover junction endodeoxyribonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1935 | 33 aa hypothetical protein | |||
| 1940 | R | StyUK1IP (99% identity) | CAGAG | Sen33876ORF1945P |
| 1945 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33876ORF1945P |
| 1950 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4900 | 95 aa hypothetical protein | |||
| 4905 | R | StyUK1MrrP (100% identity) | Sen33876MrrP | |
| 4910 | DEAD/DEAH box helicase | |||