Salmonella enterica subsp. enterica serovar Typhimurium STy01 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STy01 RM systems
Ref: Ronholm,J. et al. unpublished
REBASE ref # 22795
Contig set: 4,965,918 bp
GenBank #: MATJ00000000 (NZ_MATJ00000000)
REBASE acronym: SenSty01
Org_num: 21380
All begin BBC55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10655 | restriction endonuclease | |||
| 10660 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSty01ORF10665P |
| 10665 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenSty01ORF10665P |
| 10670 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSty01ORF10665P |
| 10675 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1295 | M | M.StyUK1V (91% identity) | GATC | M.SenSty01ORF1295P |
| 1300 | crossover junction endodeoxyribonuclease | |||
| 335 | M | M.Sty13348ORF110P (90% identity) | GATC | M.SenSty01ORF335P |
| 340 | crossover junction endodeoxyribonuclease | |||
| 18315 | ribulose-phosphate 3-epimerase | |||
| 18320 | M | M.StyTDamP (100% identity) | GATC | M.SenSty01DamP |
| 18325 | cell division protein DamX | |||
| 23060 | DUF2556 domain-containing protein | |||
| 23065 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSty01ORF23065P |
| 23070 | Fis family transcriptional regulator | |||
| 3610 | drug/metabolite exporter YedA | |||
| 3615 | V | V.StyUK1DcmP (100% identity) | V.SenSty01DcmP | |
| 3620 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSty01DcmP |
| 3625 | phosphohydrolase | |||
| 23525 | 73 aa hypothetical protein | |||
| 23530 | M | M.StyUK1ORFAP (100% identity) | M.SenSty01ORF23530P | |
| 23535 | 62 aa hypothetical protein | |||
| 10825 | DNA repair protein | |||
| 10830 | RM | StyUK1IV (100% identity) | GATCAG | SenSty01ORF10830P |
| 10835 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17330 | sugar transporter | |||
| 17335 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSty01ORF17335P |
| 17340 | R | StyUK1IP (99% identity) | CAGAG | SenSty01ORF17335P |
| 17345 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10650 | 95 aa hypothetical protein | |||
| 10655 | R | StyUK1MrrP (100% identity) | SenSty01MrrP | |
| 10660 | type I restriction-modification system | |||