Salmonella enterica CRJJGF_00159 |
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Putative Salmonella enterica CRJJGF_00159 RM systems
Ref: McClelland,M. et al. unpublished
REBASE ref # 22766
Contig set: 4,903,054 bp
GenBank #: JQYK00000000 (NZ_JQYK00000000)
REBASE acronym: Sen159
Org_num: 21221
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25 | 71 aa hypothetical protein | |||
| 26 | S | S.Sen103872ORF21065P (100% identity) | AACNNNNNNGTRC | S.Sen159ORFGP |
| 29 | M | M.Sen00093ORFDP (96% identity) | AACNNNNNNGTRC | M.Sen159ORFGP |
| 34 | R | Sen103872ORF21065P (99% identity) | AACNNNNNNGTRC | Sen159ORFGP |
| 41 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | phosphohydrolase | |||
| 33 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen159Dcm2P |
| 35 | V | very short patch repair endonuclease | V.Sen159Dcm2P | |
| 36 | inner membrane transporter yedA | |||
| 28 | 284 aa hypothetical protein | |||
| 29 | M | M.Ssp15303ORFEP (100% identity) | M.Sen159ORFDP | |
| 30 | phage-related DNA-binding protein | |||
| 43 | Fis family transcriptional regulator | |||
| 44 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen159ORFIP |
| 46 | 102 aa hypothetical protein | |||
| 92 | 77 aa hypothetical protein | |||
| 93 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Sen159DcmP |
| 95 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain | |||
| 84 | 67 aa hypothetical protein | |||
| 85 | M | M.SmapR478ORF272P (100% identity) | M.Sen159ORFBP | |
| 86 | 106 aa hypothetical protein | |||
| 124 | 75 aa hypothetical protein | |||
| 126 | M | M.Sen79107ORF14955P (99% identity) | GATC | M.Sen159ORFAP |
| 128 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 132 | MFS transporter | |||
| 134 | M | M.Sens24184ORF16485P (99% identity) | CAGAG | M.Sen159ORFHP |
| 135 | R | SenMCS11ORFBP (99% identity) | CAGAG | Sen159ORFHP |
| 137 | 71 aa hypothetical protein SEHO0A_00325 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | 340 aa hypothetical protein | |||
| 42 | R | StyTMrrP (99% identity) | Sen159MrrP | |
| 43 | 62 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17 | ribulose-phosphate 3-epimerase | |||
| 19 | M | 278 aa hypothetical protein | GATC | M.Sen159ORFJP |
| 20 | cell division protein DamX | |||