Escherichia coli Y5 |
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Putative Escherichia coli Y5 RM systems
Ref: Yu,Y. et al. unpublished
REBASE ref # 23194
| Sequence length: | GenBank #: | |
| Chromosome: | 4,839,266 bp | CP013483 |
| plasmid pECY53: | 136,243 bp | KT997783 |
| plasmid pECY55: | 124,378 bp | KU043115 |
REBASE acronym: EcoY5
Org_num: 21010
All begin ATO45_, ATO45_1P, ATO45_3P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20390 | 50S ribosome-binding GTPase | |||
| 20395 | M | M.Sso8ORF17680P (100% identity) | M.EcoY5ORF20395P | |
| 20400 | S | S.Sso8ORF17680P (100% identity) | S.EcoY5ORF20395P | |
| 20405 | R | Sso8ORF17680P (100% identity) | EcoY5ORF20395P | |
| 20410 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 915 | 329 aa hypothetical protein | |||
| 920 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.EcoY5ORF920P |
| 925 | replication protein A | |||
| 3805 | cell division protein DamX | |||
| 3810 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoY5DamP |
| 3815 | ribulose phosphate epimerase | |||
| 4455 | 59 aa hypothetical protein | |||
| 4460 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoY5ORF4460P |
| 4465 | Fis family transcriptional regulator | |||
| 11520 | hydrolase | |||
| 11525 | M | M.Ecoppa8DcmP (100% identity) | CCWGG | M.EcoY5DcmP |
| 11530 | V | V.SflSTLE3DcmP (100% identity) | V.EcoY5DcmP | |
| 11535 | multidrug DMT transporter | |||
| plasmid pECY53 | ||||
| 405 | Ferredoxin | |||
| 410 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.EcoY5ORF410P |
| plasmid pECY55 | ||||
| 350 | 103 aa hypothetical protein | |||
| 26 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoY5ORF26P | |
| 355 | cytoplasmic protein | |||