Escherichia coli 109497 |
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Putative Escherichia coli 109497 RM systems
Ref: Arivett,B.A. et al. unpublished
REBASE ref # 22688
Contig set: 5,221,316 bp
GenBank #: LORD00000000 (NZ_LORD00000000)
REBASE acronym: Eco109497
Org_num: 20935
All begin LT28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4839 | Phd_YefM | |||
| ??? | M | M.SenceORFJP (100% identity) | M.Eco109497ORF4840P | |
| 4841 | S | S.EcoC0013ORF23700P (100% identity) | S.Eco109497ORF4840P | |
| 3508 | Toxic protein SymE | |||
| 3509 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco109497ORF3511P |
| 3510 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco109497ORF3511P |
| 3511 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco109497ORF3511P |
| 3512 | Mrr restriction system protein | |||
| 250 | 156 aa hypothetical protein | |||
| 251 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco109497ORF252P |
| 252 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco109497ORF252P |
| 253 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco109497ORF252P |
| 254 | 260 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4993 | 65 aa hypothetical protein | |||
| 4994 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco109497ORF4994P |
| 4995 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco109497ORF4994P |
| 4996 | DNA-invertase hin | |||
| 3164 | Plasmid segregation protein ParM | |||
| 3165 | M | M.Xca80ORFEP (100% identity) | M.Eco109497ORF3165P | |
| 3166 | 73 aa hypothetical protein | |||
| 4432 | 5-methylcytosine-specific restriction enzyme | |||
| 4433 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco109497ORF4434P |
| 4434 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco109497ORF4434P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco109497ORF4434P |
| 4444 | hydrolase | |||
| 4445 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco109497DcmP |
| 4446 | V | V.SflC32DcmP (74% identity) | V.Eco109497DcmP | |
| 4447 | inner membrane transporter YedA | |||
| 3152 | 308 aa hypothetical protein | |||
| 3153 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco109497ORF3153P | |
| 3154 | 73 aa hypothetical protein | |||
| 2743 | 59 aa hypothetical protein | |||
| 2744 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco109497ORF2744P |
| 2745 | DNA-binding protein Fis | |||
| 2203 | Ribulose-phosphate 3-epimerase | |||
| 2204 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco109497DamP |
| 2205 | cell division protein DamX | |||
| 1154 | 71 aa hypothetical protein | |||
| 1155 | M | M.KpnYN1ORFGP (89% identity) | M.Eco109497ORF1155P | |
| 1156 | HTH-type transcriptional regulator ImmR | |||
| 2409 | 308 aa hypothetical protein | |||
| 2410 | M | M.Sso866ORF27155P (100% identity) | M.Eco109497ORF2410P | |
| 2411 | 73 aa hypothetical protein | |||
| 1893 | 65 aa hypothetical protein | |||
| 1894 | M | M.EcosS9ORF10680P (100% identity) | M.Eco109497ORF1894P | |
| 1897 | Anti-adapter protein IraM | |||
| 3429 | 119 aa hypothetical protein | |||
| 3430 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco109497ORF3430P |
| 3431 | NinB protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4430 | teichuronic acid biosynthesis | |||
| 4431 | R | EcosS3McrBP (100% identity) | Eco109497McrBP | |
| 4432 | R | EcosS9McrCP (100% identity) | Eco109497McrCP | |
| 4433 | Type II restriction endonuclease | |||