Escherichia coli 105454 |
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Putative Escherichia coli 105454 RM systems
Ref: Arivett,B.A. et al. unpublished
REBASE ref # 22688
Contig set: 5,334,594 bp
GenBank #: LOJL00000000 (NZ_LOJL00000000)
REBASE acronym: Eco105454
Org_num: 20932
All begin LT26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4273 | Toxic protein SymE | |||
| 4274 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco105454ORF4276P |
| 4275 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco105454ORF4276P |
| 4276 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco105454ORF4276P |
| 4277 | Mrr restriction system protein | |||
| 209 | 260 aa hypothetical protein | |||
| 210 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco105454ORF211P |
| 211 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco105454ORF211P |
| 212 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco105454ORF211P |
| 213 | 156 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4501 | M | M.EcosS9ORF10680P (100% identity) | M.Eco105454ORF4501P | |
| 4502 | 65 aa hypothetical protein | |||
| 4724 | 141 aa hypothetical protein | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco105454ORF4725P |
| 4726 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco105454ORF4725P |
| 4727 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco105454ORF4725P |
| 4728 | 5-methylcytosine-specific restriction enzyme | |||
| 4848 | 1213 aa hypothetical protein | |||
| 4849 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco105454ORF4849P |
| 4850 | PglZ domain protein | |||
| 2022 | hydrolase | |||
| 2023 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco105454DcmP |
| 2024 | V | V.SflC32DcmP (74% identity) | V.Eco105454DcmP | |
| 2025 | inner membrane transporter YedA | |||
| 4983 | 308 aa hypothetical protein | |||
| 4984 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco105454ORF4984P | |
| 4985 | 73 aa hypothetical protein | |||
| 980 | 72 aa hypothetical protein | |||
| 981 | M | M.KpnYN1ORFGP (89% identity) | M.Eco105454ORF981P | |
| 982 | HTH-type transcriptional regulator ImmR | |||
| 4354 | Recombination-associated protein RdgC | |||
| 4355 | M | M.EcoFu022ORF23585P (100% identity) | M.Eco105454ORF4355P | |
| 4359 | Tellurite resistance protein TerB | |||
| 4088 | Ribulose-phosphate 3-epimerase | |||
| 4089 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco105454DamP |
| 4090 | cell division protein DamX | |||
| 4489 | PerC transcriptional activator | |||
| 4490 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco105454ORF4490P |
| 4491 | LexA repressor | |||
| 4497 | 67 aa hypothetical protein | |||
| 4498 | M | M.Sso63633ORF22290P (100% identity) | M.Eco105454ORF4498P | |
| 4499 | Lysis protein S | |||
| 432 | DNA-binding protein Fis | |||
| 433 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco105454ORF433P |
| 434 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4727 | Type II restriction endonuclease | |||
| 4728 | R | EcosS9McrCP (100% identity) | Eco105454McrCP | |
| 4729 | R | EcosS3McrBP (100% identity) | Eco105454McrBP | |
| 4730 | teichuronic acid biosynthesis | |||