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Putative Propionibacterium freudenreichii JS8 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,655,373 bp
GenBank #: LT576042
REBASE acronym: PfrJS8
Org_num: 20455
All begin PFR_JS8_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
239 | DNA protecting protein DprA | |||
240 | R | PfrJS7aIP (100% identity) | ATCNNNNNGTCG | PfrJS8IP |
241 | S | S.PfrJS7aI (100% identity) | ATCNNNNNGTCG | S.PfrJS8I |
??? | M | M.PfrJS7aI (100% identity) | ATCNNNNNGTCG | M.PfrJS8I |
244 | zinc-binding sorbitol dehydrogenase | |||
2156 | ABC transporter multidrug efflux pump, fused | |||
??? | M | M.PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | M.PfrJS8III |
??? | S | S.PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | S.PfrJS8III |
2159 | R | PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | PfrJS8IIIP |
2160 | PIN domain protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2012 | Carbohydrate kinase, PfkB family | |||
2013 | M | M.PfrPBF13ORFBP (100% identity) | CCWGG | M.PfrJS8II |
2014 | 703 aa Hypothetical protein | |||
2181 | 111 aa Hypothetical protein | |||
2182 | R | PfrUF1ORFAP (100% identity) | PfrJS8ORF2182P | |
2183 | 64 aa Hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1946 | PF07510 family protein | |||
1947 | R | PfrPBF04ORFBP (99% identity) | PfrJS8ORF1947P | |
1948 | 58 aa Hypothetical protein | |||
1987 | Protein of hypothetical function DUF299 | |||
??? | R | PfrTL29Mrr3P (100% identity) | PfrJS8MrrP | |
1989 | MATE efflux family protein |