Escherichia coli NADC 5570/86-24/6564 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NADC 5570/86-24/6564 RM systems
Ref: Sharma,V.K. and Bayles,D.O. unpublished
REBASE ref # 23308
| Sequence length: | GenBank #: | |
| Chromosome: | 5,466,770 bp | CP017251 |
| plasmid pO157: | 92,691 bp | CP017252 |
REBASE acronym: Eco5570
Org_num: 20628
All begin BHW77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24270 | 94 aa hypothetical protein | |||
| 24275 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5570ORF24290P |
| 24280 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco5570ORF24290P |
| 24285 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5570ORF24290P |
| 24290 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2140 | cell division protein DamX | |||
| 2145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5570DamP |
| 2150 | ribulose-phosphate 3-epimerase | |||
| 2675 | DUF2556 domain-containing protein | |||
| 2680 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5570ORF2680P |
| 2685 | Fis family transcriptional regulator | |||
| 10320 | ninB protein | |||
| 10325 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco5570ORF10325P |
| 10330 | 335 aa hypothetical protein | |||
| 13255 | TrmB family transcriptional regulator | |||
| 13260 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco5570ORF13265P | |
| 13275 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 14855 | 329 aa hypothetical protein | |||
| 14860 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco5570ORF14870P | |
| 14865 | 81 aa hypothetical protein | |||
| 18060 | drug/metabolite exporter YedA | |||
| 18065 | V | V.EcosPA8DcmP (100% identity) | V.Eco5570DcmP | |
| 18070 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5570DcmP |
| 18075 | phosphohydrolase | |||
| 24555 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5570ORF24565P |
| 24560 | helicase | |||
| plasmid pO157 | ||||
| 28300 | 73 aa hypothetical protein | |||
| 28305 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco6564ORF28305P | |
| 28310 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24290 | 113 aa hypothetical protein | |||
| ??? | 428 aa hypothetical protein | |||