Escherichia coli NADC 5570/86-24/6565 |
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Putative Escherichia coli NADC 5570/86-24/6565 RM systems
Ref: Sharma,V.K. and Bayles,D.O. unpublished
REBASE ref # 23308
| Sequence length: | GenBank #: | |
| Chromosome: | 5,467,107 bp | CP017249 |
| plasmid pO157: | 92,690 bp | CP017250 |
REBASE acronym: Eco5570
Org_num: 20627
All begin BHW76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24280 | 94 aa hypothetical protein | |||
| 24285 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5570ORF24290P |
| 24290 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco5570ORF24290P |
| 24295 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5570ORF24290P |
| 24300 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2140 | cell division protein DamX | |||
| 2145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5570DamP |
| 2150 | ribulose-phosphate 3-epimerase | |||
| 2675 | DUF2556 domain-containing protein | |||
| 2680 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5570ORF2680P |
| 2685 | Fis family transcriptional regulator | |||
| 10320 | ninB protein | |||
| 10325 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco5570ORF10325P |
| 10330 | 335 aa hypothetical protein | |||
| 13260 | TrmB family transcriptional regulator | |||
| 13265 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco5570ORF13265P | |
| 13280 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 14865 | 329 aa hypothetical protein | |||
| 14870 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco5570ORF14870P | |
| 14875 | 81 aa hypothetical protein | |||
| 18045 | drug/metabolite exporter YedA | |||
| 18050 | V | V.EcosPA8DcmP (100% identity) | V.Eco5570DcmP | |
| 18055 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5570DcmP |
| 18060 | phosphohydrolase | |||
| 24565 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5570ORF24565P |
| 24570 | helicase | |||
| plasmid pO157 | ||||
| 28310 | 73 aa hypothetical protein | |||
| 28315 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco5570ORF28315P | |
| 28320 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24300 | 113 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco5570GmrDP | |
| 24310 | 293 aa hypothetical protein | |||