Escherichia coli O157:H7 4276 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 4276 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,404,558 bp | CP017442 |
| plasmid pO157: | 92,583 bp | CP017443 |
REBASE acronym: Eco4276
Org_num: 20488
All begin A4C51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24225 | 94 aa hypothetical protein | |||
| 24230 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4276IP |
| 24235 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4276I |
| 24240 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4276I |
| 24245 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2370 | cell division protein DamX | |||
| 2375 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4276DamP |
| 2380 | ribulose-phosphate 3-epimerase | |||
| 2905 | DUF2556 domain-containing protein | |||
| 2910 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4276ORF2910P |
| 2915 | Fis family transcriptional regulator | |||
| 9845 | ninB protein | |||
| 9850 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco4276ORF9850P |
| 9855 | protein ninE | |||
| 10695 | phosphohydrolase | |||
| 10700 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4276Dcm |
| 10705 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco4276DcmP |
| 10710 | drug/metabolite exporter YedA | |||
| 15160 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 15175 | M | M.EcoNE92ORF14960P (100% identity) | M.Eco4276ORF15175P | |
| 15180 | TrmB family transcriptional regulator | |||
| 22490 | 130 aa hypothetical protein | |||
| 22495 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.Eco4276ORF22495P |
| ??? | R | Ecos32ORF15460P (100% identity) | GCCGGC | Eco4276ORF22495P |
| 22505 | glutamate-5-semialdehyde dehydrogenase | |||
| 24505 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4276II |
| 24510 | helicase | |||
| plasmid pO157 | ||||
| 27860 | 101 aa hypothetical protein | |||
| 27865 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4276ORF27865P | |
| 27870 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24245 | 113 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco4276GmrDP | |
| 24255 | 293 aa hypothetical protein | |||