Escherichia coli O157:H7 3384 |
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Putative Escherichia coli O157:H7 3384 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,438,591 bp | CP017440 |
| plasmid pO157: | 92,729 bp | CP017441 |
REBASE acronym: Eco3384
Org_num: 20486
All begin A4C38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24550 | 94 aa hypothetical protein | |||
| 24555 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco3384IP |
| 24560 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco3384I |
| 24565 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco3384I |
| 24570 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2375 | cell division protein DamX | |||
| 2380 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3384DamP |
| 2385 | ribulose-phosphate 3-epimerase | |||
| 2925 | DUF2556 domain-containing protein | |||
| 2930 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco3384ORF2930P |
| 2935 | Fis family transcriptional regulator | |||
| 9055 | ninB protein | |||
| 9060 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco3384ORF9060P |
| 9065 | protein ninE | |||
| 10455 | phosphohydrolase | |||
| 10460 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3384Dcm |
| 10465 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco3384DcmP |
| 10470 | drug/metabolite exporter YedA | |||
| 14210 | 329 aa hypothetical protein | |||
| 14215 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco3384ORF14215P | |
| 14220 | 81 aa hypothetical protein | |||
| 15085 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 15100 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco3384ORF15100P | |
| 15105 | TrmB family transcriptional regulator | |||
| 18040 | antirepressor | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco3384ORFAP |
| 18050 | ninB protein | |||
| 24835 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco3384II |
| 24840 | helicase | |||
| plasmid pO157 | ||||
| 28095 | 101 aa hypothetical protein | |||
| 28100 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco3384ORF28100P | |
| 28105 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24570 | 113 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco3384GmrDP | |
| 24580 | 293 aa hypothetical protein | |||