Escherichia coli MS6198 |
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Putative Escherichia coli MS6198 RM systems
Ref: Hancock,S.J. et al. unpublished
REBASE ref # 22589
| Sequence length: | GenBank #: | |
| Chromosome: | 5,176,750 bp | CP015834 |
| plasmid pMS6198A: | 137,565 bp | CP015835 |
| plasmid pMS6198C: | 98,242 bp | CP015837 |
| plasmid pMS6198D: | 50,899 bp | CP015838 |
REBASE acronym: Eco6198
Org_num: 20300
All begin MS6198_, MS6198_A, MS6198_C, MS6198_D
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21420 | WLM domain protein | |||
| 21430 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco6198ORF21470P |
| 21440 | 620 aa hypothetical protein | |||
| 21450 | 227 aa hypothetical protein | |||
| 21460 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco6198ORF21470P |
| 21470 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco6198ORF21470P |
| 21480 | Integrase core domain protein | |||
| 51140 | Toxic protein SymE | |||
| 51160 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco6198ORF51170P |
| 51170 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco6198ORF51170P |
| 51180 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco6198ORF51170P |
| 51200 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9370 | 75 aa hypothetical protein | |||
| 9380 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco6198ORF9380P |
| 9390 | Bacteriophage replication gene A protein (GPA) | |||
| 22010 | inner membrane transporter YedA | |||
| ??? | V | V.EcoNIH1DcmP (100% identity) | V.Eco6198DcmP | |
| 22030 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco6198DcmP |
| 22040 | hydrolase | |||
| 37730 | Prophage CP4-57 integrase | |||
| 37750 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco6198ORFAP |
| 37760 | 59 aa hypothetical protein | |||
| 38860 | Ribulose-phosphate 3-epimerase | |||
| 38870 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco6198DamP |
| 38880 | cell division protein DamX | |||
| 47260 | 67 aa hypothetical protein | |||
| 47270 | M | M.EcoSTEFF1ORF20090P (100% identity) | M.Eco6198ORF47270P | |
| 47280 | Lysis protein S | |||
| plasmid pMS6198A | ||||
| 47 | 120 aa hypothetical protein | |||
| 48 | M | M.Vch11614ORFCP (100% identity) | M.Eco6198ORF48P | |
| 49 | 149 aa hypothetical protein | |||
| plasmid pMS6198C | ||||
| 30 | nucleoid-associated protein RdgC | |||
| 31 | M | M.Sen94620ORF28085P (100% identity) | M.Eco6198ORF31P | |
| 34 | 57 aa hypothetical protein | |||
| plasmid pMS6198D | ||||
| 44 | 73 aa hypothetical protein | |||
| 45 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco6198ORF45P | |
| 46 | Plasmid stability protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51120 | R | SenHNK130McrCP (100% identity) | Eco6198McrCP | |
| 51130 | R | Msa17McrB2P (100% identity) | Eco6198McrBP | |
| 51140 | Toxic protein SymE | |||
| 51180 | Type-1 restriction enzyme R protein | |||
| 51200 | R | Ssp28760MrrP (100% identity) | Eco6198MrrP | |
| 51210 | GTP-binding protein YjiA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 47180 | 330 aa hypothetical protein | |||
| ??? | M | M.EcocdtDamP (100% identity) | GATC | M.Eco6198ORF47190P |
| 47200 | LexA repressor | |||