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Putative Lentzea species DHS C013 RM systems
Ref: Cao,C. unpublished
REBASE ref # 22486
Complete sequence: 9,997,872 bp
GenBank #: CP016793
REBASE acronym: Lsp13
Org_num: 19997
All begin BBK82_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
520 | 94 aa hypothetical protein | |||
525 | R | Ssp3180IP (84% identity) | CAGNNNNNGCTC | Lsp13IP |
??? | S | S.Ssp794ORF9575P (47% identity) | CAGNNNNNGCTC | S.Lsp13I |
535 | M | M.MspRV43ORFEP (84% identity) | CAGNNNNNGCTC | M.Lsp13I |
545 | 370 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3590 | 102 aa hypothetical protein | |||
3595 | M | M.Ssp530ORF39010P (59% identity) | M.Lsp13ORF3595P | |
3600 | DNA methyltransferase | |||
3595 | DNA methyltransferase | |||
3600 | M | M1.MauH14ORF5455P (62% identity) | M.Lsp13ORF3600P | |
3605 | 69 aa hypothetical protein | |||
5220 | 259 aa hypothetical protein | |||
5225 | R | Abe43387ORFFP (65% identity) | Lsp13ORF5230P | |
5230 | M | M.Alu2430ORF33180P (76% identity) | M.Lsp13ORF5230P | |
5235 | MerR family transcriptional regulator | |||
7615 | 70 aa hypothetical protein | |||
7620 | M | M1.Kph1111ORF8350P (36% identity) | M.Lsp13ORF7620P | |
7625 | SAM-dependent methyltransferase | |||
13140 | 210 aa hypothetical protein | |||
13145 | M | M.CacDORF3037P (46% identity) | M.Lsp13ORF13145P | |
13150 | 244 aa hypothetical protein | |||
13440 | 415 aa hypothetical protein | |||
13445 | M | M.Lsp22ORF27150P (85% identity) | CCCGGG | M.Lsp13ORF13445P |
13450 | 252 aa hypothetical protein | |||
20080 | protein kinase | |||
20085 | M | M.LspS12ORF38230P (70% identity) | M.Lsp13ORF20085P | |
20090 | 233 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1145 | transcriptional regulator | |||
1150 | R | SbfMcrBP (54% identity) | Lsp13McrBP | |
1155 | R | SbfMcrCP (45% identity) | Lsp13McrCP | |
1160 | glycoside hydrolase |