Escherichia coli O111:H- str. 11128 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O111:H- str. 11128 RM systems
Ref: Ogura,Y. et al. Proc. Natl. Acad. Sci. U.S.A. 106 (42), 17939-17944 (2009)
REBASE ref # 11297
| Sequence length: | GenBank #: | |
| Chromosome: | 5,371,077 bp | AP010960 (NC_013364) |
| plasmid pO111_1: | 204,604 bp | AP010961 (NC_013365) |
| plasmid pO111_2: | 97,897 bp | AP010962 (NC_013370) |
REBASE acronym: Eco111
Org_num: 5591
All begin ECO111_, ECO111_p1-, ECO111_p2-
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 317 | IS629 transposase OrfA | |||
| 318 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.Eco111ORF318P |
| 319 | R | Ecos32ORF15460P (100% identity) | GCCGGC | Eco111ORF318P |
| 320 | 55 aa hypothetical protein | |||
| 879 | conserved predicted protein | |||
| 880 | R | Esp911AORF970P (100% identity) | GGTNACC | Eco111ORF881P |
| 881 | M | M.Esp911AORF970P (100% identity) | GGTNACC | M.Eco111ORF881P |
| 882 | site-specific recombinase | |||
| 1144 | 177 aa hypothetical protein | |||
| 1145 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco111ORF1145P |
| 1146 | 335 aa hypothetical protein | |||
| 1430 | conserved predicted protein | |||
| 1431 | M | M.EcoE2863ORF1308P (100% identity) | M.Eco111ORF1431P | |
| 1432 | 616 aa hypothetical protein | |||
| 1596 | conserved predicted protein | |||
| 1597 | M | M.EcoE2863ORF1482P (100% identity) | M.Eco111ORF1597P | |
| 1598 | 648 aa hypothetical protein | |||
| 2430 | Shiga toxin 2 subunit A | |||
| 2431 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco111ORF2431P | |
| 2432 | predicted lipoprotein | |||
| 2540 | predicted inner membrane protein | |||
| 2541 | V | V.SsoSE61DcmP (100% identity) | V.Eco111ORF2542P | |
| 2542 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco111ORF2542P |
| 2543 | predicted phosphohydrolase | |||
| 2701 | predicted NinE protein | |||
| 2702 | M | M.EcoE2863ORF2546P (100% identity) | GATC | M.Eco111ORF2702P |
| 2703 | 148 aa hypothetical protein | |||
| 4088 | global DNA-binding transcriptional dual | |||
| 4089 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco111ORF4089P |
| 4090 | predicted membrane protein | |||
| 4195 | D-ribulose-5-phosphate 3-epimerase | |||
| 4196 | M | DNA adenine methylase | GATC | M.Eco111DamP |
| 4197 | conserved predicted protein | |||
| 4876 | 138 aa hypothetical protein | |||
| 4877 | M | M.EcoLSU61ORF26180P (100% identity) | M.Eco111ORF4877P | |
| 4878 | 116 aa hypothetical protein | |||
| 5155 | 865 aa hypothetical protein | |||
| 5156 | RM | EcoFP2ORF70P (100% identity) | Eco111ORF5156P | |
| 5157 | ATPase-like protein | |||
| plasmid pO111_1 | ||||
| 93 | conserved predicted protein | |||
| 94 | M | M.StyCORF187P (99% identity) | CCWGG | M.Eco111ORF94P |
| 95 | nuclease | |||
| 228 | DNA-binding protein | |||
| 229 | M | M.Ype21801ORF197P (100% identity) | M.Eco111ORF229P | |
| 230 | conserved predicted protein | |||
| plasmid pO111_2 | ||||
| 65 | probable recombination associated protein | |||
| 66 | M | M.EcoMBT5ORF29545P (100% identity) | M.Eco111ORF66P | |
| 67 | lipoprotein | |||