Escherichia coli O103:H2 str. 12009 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O103:H2 str. 12009 RM systems
Ref: Ogura,Y. et al. Proc. Natl. Acad. Sci. U.S.A. (2009) In press
REBASE ref # 11297
| Sequence length: | GenBank #: | |
| Chromosome: | 5,449,314 bp | AP010958 (NC_013353) |
| plasmid pO103: | 75,546 bp | AP010959 (NC_013354) |
REBASE acronym: Eco103
Org_num: 5588
All begin ECO103_, ECO103_p
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 521 | 162 aa hypothetical protein | |||
| 522 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco103ORF522P |
| 523 | 108 aa hypothetical protein | |||
| 854 | conserved predicted protein | |||
| 855 | R | Esp911AORF970P (100% identity) | GGTNACC | Eco103ORF856P |
| 856 | M | M.Esp911AORF970P (100% identity) | GGTNACC | M.Eco103ORF856P |
| 857 | site-specific recombinase | |||
| 1381 | predicted lipoprotein | |||
| 1382 | M | M.EcoYB141ORF15470P (100% identity) | M.Eco103ORF1382P | |
| 1383 | 648 aa hypothetical protein | |||
| 2096 | predicted TciA/TerB-like protein | |||
| 2097 | M | M.EcoSJ7ORF6975P (100% identity) | M.Eco103ORF2097P | |
| 2098 | predicted lipoprotein | |||
| 2209 | predicted inner membrane protein | |||
| 2210 | V | V.SsoSE61DcmP (100% identity) | V.Eco103DcmP | |
| 2211 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco103DcmP |
| 2212 | predicted phosphohydrolase | |||
| 2854 | predicted phage repressor protein CI | |||
| 2855 | M | M.EcoE2863ORF2986P (90% identity) | CTGCAG | M.Eco103ORF2855P |
| 2856 | R | EcoF690ORF30660P (99% identity) | CTGCAG | Eco103ORF2855BP |
| 2857 | 156 aa hypothetical protein | |||
| 2880 | probable regulatory protein | |||
| 2881 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco103ORF2881P |
| 2882 | 70 aa hypothetical protein | |||
| 3135 | 97 aa hypothetical protein | |||
| 3136 | M | M.EcoSTEC639ORF9630P (100% identity) | M.Eco103ORF3136P | |
| 3137 | 309 aa hypothetical protein | |||
| 4000 | global DNA-binding transcriptional dual | |||
| 4001 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco103ORF4001P |
| 4002 | predicted membrane protein | |||
| 4104 | D-ribulose-5-phosphate 3-epimerase | |||
| 4105 | M | DNA adenine methylase | GATC | M.Eco103DamP |
| 4106 | conserved predicted protein | |||
| 5191 | 161 aa hypothetical protein | |||
| 5192 | M | M.Ecoph2011ORFAP (100% identity) | GATC | M.Eco103ORF5192P |
| 5193 | probable antirepressor protein | |||
| plasmid pO103 | ||||
| 70 | 72 aa hypothetical protein EC32608_A0041 | |||
| ??? | M | M.Sen527ORF25750P (100% identity) | M.Eco103ORFAP | |
| 73 | conserved predicted protein | |||