Escherichia coli O26:H11 str. 11368 |
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Putative Escherichia coli O26:H11 str. 11368 RM systems
Ref: Ogura,Y. et al. Proc. Natl. Acad. Sci. U.S.A. (2009) In press
REBASE ref # 11297
| Sequence length: | GenBank #: | |
| Chromosome: | 5,697,240 bp | AP010953 (NC_013361) |
| plasmid pO26_1: | 85,167 bp | AP010954 (NC_013369) |
| plasmid pO26_2: | 63,365 bp | AP010955 (NC_013362) |
| plasmid pO26_3: | 5,686 bp | AP010956 (NC_013363) |
REBASE acronym: EcoO26
Org_num: 5589
All begin ECO26_, ECO26_p1-, ECO26_p2-, ECO26_p3-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5539 | 113 aa hypothetical protein | |||
| 5540 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.EcoO26ORF5541P |
| 5541 | M | M.EcoFHI90ORFAP (100% identity) | TACNNNNNNNRTRTC | M.EcoO26ORF5541P |
| 5542 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | EcoO26ORF5541P |
| 5543 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1481 | conserved predicted protein | |||
| 1482 | M | M.EcoSO179ORF21175P (100% identity) | M.EcoO26ORF1482P | |
| 1483 | predicted TciA/TerB-like protein | |||
| 1592 | 177 aa hypothetical protein | |||
| 1593 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoO26ORF1593P |
| 1594 | 60 aa hypothetical protein | |||
| 2845 | predicted inner membrane protein | |||
| 2846 | V | very short patch repair endonuclease | V.EcoO26DcmP | |
| 2847 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoO26DcmP |
| 2848 | HD superfamily phosphohydrolase | |||
| 3195 | predicted NinE protein | |||
| 3196 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoO26ORF3196P |
| 3197 | 148 aa hypothetical protein | |||
| 3699 | 108 aa hypothetical protein | |||
| 3700 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.EcoO26ORF3700P |
| 3701 | 162 aa hypothetical protein | |||
| 4367 | global DNA-binding transcriptional dual | |||
| 4368 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoO26ORF4368P |
| 4369 | predicted membrane protein | |||
| 4474 | D-ribulose-5-phosphate 3-epimerase | |||
| 4475 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoO26DamP |
| 4476 | conserved predicted protein | |||
| plasmid pO26_1 | ||||
| 54 | conserved predicted protein | |||
| 55 | M | M.EcopO26ORF185P (100% identity) | M.EcoO26ORF55P | |
| 56 | conserved predicted protein | |||
| plasmid pO26_2 | ||||
| 10 | conserved predicted protein | |||
| 11 | M | M.Eco4356ORFJP (100% identity) | M.EcoO26ORF11P | |
| 12 | conserved predicted protein | |||
| plasmid pO26_3 | ||||
| 4 | mobilization protein MbeA | |||
| 5 | M | M.SenSerDORFAP (100% identity) | CCWWGG | M.EcoO26ORF5P |
| 6 | R | Efe1ORFMP (91% identity) | CCWWGG | EcoO26ORF5P |