Escherichia coli UPEC 26-1 |
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Putative Escherichia coli UPEC 26-1 RM systems
Ref: Subhadra,B. et al. unpublished
REBASE ref # 22502
| Sequence length: | GenBank #: | |
| Chromosome: | 5,178,720 bp | CP016497 |
| plasmid unnamed1: | 151,033 bp | CP016498 |
REBASE acronym: EcoC261
Org_num: 20066
All begin BB344_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14405 | 550 aa hypothetical protein | |||
| 14410 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoC261ORF14415P |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoC261ORF14415P |
| 14420 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoC261ORF14415P |
| 14425 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3665 | phosphohydrolase | |||
| 3670 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC261DcmP |
| 3675 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoC261DcmP |
| 3680 | drug/metabolite exporter YedA | |||
| 7650 | protein ninE | |||
| 7655 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoC261ORF7655P |
| 7660 | 146 aa hypothetical protein | |||
| 16520 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 16540 | M | M.EcoS6995ORFAP (96% identity) | A | M.EcoC261ORF16540P |
| 16545 | TrmB family transcriptional regulator | |||
| 16575 | LexA family transcriptional regulator | |||
| 16580 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoC261ORF16580P |
| 16585 | 162 aa hypothetical protein | |||
| 20460 | cell division protein DamX | |||
| 20465 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC261DamP |
| 20470 | ribulose-phosphate 3-epimerase | |||
| 21075 | DUF2556 domain-containing protein | |||
| 21080 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC261ORF21080P |
| 21085 | Fis family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 26325 | 73 aa hypothetical protein | |||
| 26330 | M | M.Sfl2142ORF380P (100% identity) | M.EcoC261ORF26330P | |
| 26335 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14660 | methyl-accepting chemotaxis protein | |||
| 14665 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoC261ORF14665P |
| 14670 | R | EcoUTI89IP (100% identity) | CACAG | EcoC261ORF14665P |
| 14675 | integrase | |||