Escherichia coli O157:H7 FRIK2533 |
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Putative Escherichia coli O157:H7 FRIK2533 RM systems
Ref: Kasper,C. et al. unpublished
REBASE ref # 22406
Complete sequence: 5,645,219 bp
GenBank #: CP015842
REBASE acronym: EcoK2533
Org_num: 19864
All begin A8V31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28735 | 113 aa hypothetical protein | |||
| 28740 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoK2533ORF28745P |
| 28745 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoK2533ORF28745P |
| 28750 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoK2533ORF28745P |
| 28755 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1445 | PerC family transcriptional regulator | |||
| 1450 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoK2533ORF1450P |
| 1455 | LexA family transcriptional regulator | |||
| 29970 | lipoprotein | |||
| 9210 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoK2533ORF9210P | |
| 29975 | 61 aa hypothetical protein | |||
| 9560 | TrmB family transcriptional regulator | |||
| 9565 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoK2533ORF9565P | |
| 30070 | 38 aa hypothetical protein | |||
| 14040 | drug/metabolite exporter YedA | |||
| 14045 | V | V.EcosPA8DcmP (100% identity) | V.EcoK2533DcmP | |
| 14050 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoK2533DcmP |
| 14055 | phosphohydrolase | |||
| 14870 | NinE family protein | |||
| 14875 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoK2533ORF14875P |
| 14880 | recombination protein NinB | |||
| 30715 | NinE family protein | |||
| 16140 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoK2533ORF16140P |
| 16145 | recombination protein NinB | |||
| 22440 | Fis family transcriptional regulator | |||
| 22445 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoK2533ORF22445P |
| 22450 | transporter | |||
| 22975 | ribulose-phosphate 3-epimerase | |||
| 22980 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoK2533DamP |
| 22985 | protein DamX | |||
| 27155 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoK2533ORF27160P | |
| 27170 | Eae protein | |||
| 28350 | integrase | |||
| 28355 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoK2533ORF28365P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | EcoK2533ORF28365P |
| 28365 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoK2533ORF28365P |
| 31605 | 87 aa hypothetical protein | |||
| 28465 | ATP-dependent helicase | |||
| 28470 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoK2533ORF28470P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28725 | DUF262 domain-containing protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | EcoK2533GmrDP | |
| 28735 | 113 aa hypothetical protein | |||