Salmonella enterica subsp. enterica serovar Berta ATCC 8392 |
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Putative Salmonella enterica subsp. enterica serovar Berta ATCC 8392 RM systems
Ref: Cooper,A. et al. unpublished
REBASE ref # 22012
Contig set: 4,718,485 bp
GenBank #: JZUW00000000 (NZ_JZUW00000000)
REBASE acronym: SenBerta
Org_num: 19345
All begin VF01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12245 | transporter | |||
| 12250 | R | StySBLI (100% identity) | SenBertaORF12250P | |
| ??? | S | type I restriction endonuclease subunit M, partial | S.SenBertaORF12250P | |
| ??? | pseudogene | |||
| 4215 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenBertaORF4215P |
| 4220 | S | S.StySBLI (83% identity) | GGYANNNNNNTCG | S.SenBertaORF4215P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5240 | crossover junction endodeoxyribonuclease | |||
| 5245 | M | M.SenBNAORF22400P (100% identity) | GATC | M.SenBertaORF5245P |
| 5250 | 160 aa hypothetical protein | |||
| 12370 | endonuclease | |||
| 12375 | M | M.SenS334ORF5985P (100% identity) | GATC | M.SenBertaORF12375P |
| 12380 | 75 aa hypothetical protein | |||
| 5760 | multidrug DMT transporter | |||
| 5765 | V | V.StyUK1DcmP (100% identity) | V.SenBertaDcmP | |
| 5770 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenBertaDcmP |
| 5775 | hydrolase | |||
| 21815 | Fis family transcriptional regulator | |||
| 21820 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenBertaORF21820P |
| 21825 | membrane protein | |||
| 790 | cell division protein DamX | |||
| 795 | M | M.StyTDamP (100% identity) | GATC | M.SenBertaDamP |
| 800 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15885 | 33 aa hypothetical protein | |||
| 15890 | R | SenS334ORF18010P (99% identity) | CAGAG | SenBertaORF15895P |
| 15895 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.SenBertaORF15895P |
| 15900 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4195 | restriction endonuclease subunit M | |||
| ??? | R | Ssp3CMrrP (100% identity) | SenBertaMrrP | |
| 4215 | DNA methyltransferase | |||