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Putative Salmonella enterica NGUA18 RM systems
Ref: Useh,N.M. et al. Genome Announc 4 (2016)
REBASE ref # 21975
Contig set: 5,259,276 bp
GenBank #: BCOQ00000000 (NZ_BCOQ00000000)
REBASE acronym: SenUA18
Org_num: 19300
All begin NGUA18_, ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1 | S | S.SenUA36ORF834P (38% identity) | S.SenUA18ORFCP | |
2 | M | restriction endonuclease EcoEI subunit M | M.SenUA18ORFBP | |
4826 | M | 58 aa hypothetical protein | M.SenUA18ORF4826P | |
??? | S | S.SenUA36ORF834P (22% identity) | S.SenUA18ORF4826P | |
2990 | 322 aa hypothetical protein | |||
2991 | R | SspA292ORF20040P (100% identity) | SenUA18ORF2992P | |
2992 | M | M.SspA292ORF20040P (100% identity) | M.SenUA18ORF2992P | |
2993 | S | S.SspA292ORF20040P (100% identity) | S.SenUA18ORF2992P | |
2994 | toxic protein SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | M | DNA adenine methylase | M.SenUA18ORFDP | |
1 | M | M2.SenUA36ORF1996P (39% identity) | M.SenUA18ORFAP | |
??? | M | M1.SenUA36ORF1996P (63% identity) | GATC | M.SenUA18ORF4188P |
4189 | perC transcriptional activator | |||
407 | LexA repressor | |||
408 | M | C-5 cytosine-specific DNA methylase | M.SenUA18ORF408P | |
4251 | bacteriophage replication gene A protein | |||
4252 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.SenUA18ORF4252P |
4253 | 76 aa hypothetical protein | |||
4813 | prophage CP4-57 integrase | |||
4814 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenUA18ORF4814P |
4815 | 54 aa hypothetical protein | |||
3026 | 1204 aa hypothetical protein | |||
3027 | RM | SspA292ORF20215P (100% identity) | SenUA18ORF3027P | |
3028 | DNA replication and repair protein RecF | |||
687 | hydrolase | |||
688 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenUA18DcmP |
689 | V | V.StyUK1DcmP (100% identity) | V.SenUA18DcmP | |
690 | inner membrane transporter YedA | |||
2837 | cell division protein DamX | |||
2838 | M | M.StyTDamP (100% identity) | GATC | M.SenUA18DamP |
2839 | ribulose-phosphate 3-epimerase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2315 | sialic acid transporter | |||
2316 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenUA18ORF2316P |
2317 | R | SspA292ORF17210P (100% identity) | CAGAG | SenUA18ORF2316P |
2318 | 33 aa hypothetical protein |