Clostridium sporogenes UC9000 |
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Putative Clostridium sporogenes UC9000 RM systems
Ref: La Torre,A. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21892
Contig set: 4,338,649 bp
GenBank #: LJFK00000000 (NZ_LJFK00000000)
REBASE acronym: Csp9000
Org_num: 19352
All begin AN649_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18740 | 117 aa hypothetical protein | |||
| 18745 | M | M.Csp795ORF10580P (100% identity) | M.Csp9000ORF18745P | |
| 18750 | 481 aa hypothetical protein | |||
| 18745 | N-6 DNA methylase | |||
| 18750 | S | S.Csp795ORF10575P (100% identity) | S.Csp9000ORF18750P | |
| 18755 | 351 aa hypothetical protein | |||
| 16480 | ABC transporter ATP-binding protein | |||
| 16485 | M | M.CspS1531ORF6775P (100% identity) | M.Csp9000ORF16485P | |
| 16490 | S | S.CspS1532ORF11175P (100% identity) | S.Csp9000ORF16485P | |
| 16495 | R | CspS1532ORF11175P (100% identity) | Csp9000ORF16485P | |
| 16500 | threonine synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12905 | 222 aa hypothetical protein | |||
| 12910 | RM | CboB2450ORF19430P (99% identity) | Csp9000ORF12910P | |
| 12915 | 1244 aa hypothetical protein | |||
| 13360 | 158 aa hypothetical protein | |||
| 13365 | M | M.CboA3ORF203P (98% identity) | GCNNGC | M.Csp9000ORF13365P |
| 13370 | 271 aa hypothetical protein | |||
| 13395 | ATPase | |||
| 13400 | M | M.Cbo05ORFGP (97% identity) | M.Csp9000ORF13400P | |
| 13405 | methyltransferase | |||
| 8060 | spermidine synthase | |||
| 8065 | M | M.CspS1532ORF3960P (100% identity) | M.Csp9000ORF8065P | |
| 8070 | polysaccharide deacetylase | |||
| 15670 | 3-methyladenine DNA glycosylase | |||
| ??? | M | M.CspS1531ORF4400P (100% identity) | M.Csp9000ORF15675P | |
| 15680 | 45 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10345 | 505 aa hypothetical protein | |||
| 10350 | R | PmeBin76ORFAP (75% identity) | Csp9000ORF10355P | |
| 10355 | M | M.SwoGORF1463P (69% identity) | M.Csp9000ORF10355P | |
| 10360 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9395 | 222 aa hypothetical protein | |||
| 9400 | R | Cbo4402ORF724P (97% identity) | Csp9000ORF9400P | |
| 9405 | DNA mismatch repair protein MutT | |||