Salmonella enterica subsp. enterica F12M01377 |
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Putative Salmonella enterica subsp. enterica F12M01377 RM systems
Ref: Frink,S. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21561
Contig set: 4,975,462 bp
GenBank #: LFCD00000000 (NZ_LFCD00000000)
REBASE acronym: Sen1377
Org_num: 19076
All begin ACG11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10540 | transporter | |||
| 10545 | R | SenSA608ORF19700P (100% identity) | GGYANNNNNNTCG | Sen1377ORF10555P |
| 10550 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen1377ORF10555P |
| 10555 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen1377ORF10555P |
| 10560 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21045 | 62 aa hypothetical protein | |||
| 21050 | M | M.StyUK1ORFAP (99% identity) | M.Sen1377ORF21050P | |
| 21055 | 73 aa hypothetical protein | |||
| 22880 | Fis family transcriptional regulator | |||
| 22885 | M | pseudogene | ATGCAT | M.Sen1377ORF22885P |
| 22890 | membrane protein | |||
| 13355 | ribulose-phosphate 3-epimerase | |||
| 13360 | M | DNA adenine methylase | GATC | M.Sen1377DamP |
| 13365 | cell division protein DamX | |||
| 15850 | hydrolase | |||
| 15855 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen1377DcmP |
| 15860 | V | very short patch repair endonuclease | V.Sen1377DcmP | |
| 15865 | multidrug DMT transporter | |||
| 5640 | LexA family transcriptional regulator | |||
| 5645 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen1377ORF5645P |
| 5650 | 162 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | sugar transporter | |||
| 1695 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen1377ORF1695P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen1377ORF1695P |
| 1705 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10555 | DNA methyltransferase | |||
| ??? | R | Ssp1806MrrP (100% identity) | Sen1377MrrP | |
| 10575 | pseudogene | |||