Escherichia coli 22593 |
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Putative Escherichia coli 22593 RM systems
Ref: Valat,C. et al. Genome Announc 4 (1), e01633-15 (2016)
REBASE ref # 21418
Contig set: 6,002,039 bp
GenBank #: LMBK00000000 (NZ_LMBK00000000)
REBASE acronym: Eco22593
Org_num: 18434
All begin APZ14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6985 | 52 aa hypothetical protein EC950943_1610 | |||
| 6990 | M | M.Ecos1613ORF5225P (100% identity) | M.Eco22593ORF6990P | |
| 6995 | S | S.Ecos1613ORF5225P (100% identity) | S.Eco22593ORF6990P | |
| 7000 | 218 aa hypothetical protein | |||
| 7005 | Appr-1-p processing protein | |||
| 7010 | R | Ecos1613ORF5225P (100% identity) | Eco22593ORF6990P | |
| 7015 | metal-dependent hydrolase | |||
| 570 | 322 aa hypothetical protein | |||
| 575 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco22593ORF580P |
| ??? | M | M.EcoO26ORF5541P (100% identity) | TACNNNNNNNRTRTC | M.Eco22593ORF580P |
| 585 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco22593ORF580P |
| 590 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30500 | ninB protein | |||
| 30505 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco22593ORF30505P |
| 30510 | 590 aa hypothetical protein | |||
| 16775 | nuclease | |||
| 16780 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco22593ORF16780P |
| 16785 | 439 aa hypothetical protein | |||
| 29250 | antirepressor | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco22593ORF29255P |
| 29265 | ninB protein | |||
| 23575 | 103 aa hypothetical protein | |||
| 23580 | M | M.EcopO26ORF185P (100% identity) | M.Eco22593ORF23580P | |
| 23585 | 72 aa hypothetical protein | |||
| 28840 | 73 aa hypothetical protein | |||
| 28845 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco22593ORF28845P |
| 28850 | 103 aa hypothetical protein | |||
| 8320 | 277 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFDP (100% identity) | M1.Eco22593ORF8325P | |
| 8330 | DNA-binding protein | |||
| 21405 | 162 aa hypothetical protein | |||
| 21410 | M | M.EcoSTEC508ORF5750P (100% identity) | GATC | M.Eco22593ORF21410P |
| 21415 | LexA family transcriptional regulator | |||
| 27840 | multidrug DMT transporter | |||
| 27845 | V | V.SflSTLE3DcmP (100% identity) | V.Eco22593DcmP | |
| 27850 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco22593DcmP |
| 27855 | hydrolase, partial | |||
| 27575 | replication protein A | |||
| 27580 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.Eco22593ORF27580P |
| 27585 | 329 aa hypothetical protein | |||
| 8445 | 202 aa hypothetical protein | |||
| 8450 | M | M.YpsF1ORFBP (100% identity) | M.Eco22593ORF8450P | |
| 8455 | 108 aa hypothetical protein | |||
| 13345 | ribulose phosphate epimerase | |||
| 13350 | M | DNA adenine methylase | GATC | M.Eco22593DamP |
| 13355 | cell division protein DamX | |||
| 4665 | Fis family transcriptional regulator | |||
| 4670 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco22593ORF4670P |
| 4675 | 59 aa hypothetical protein | |||