Escherichia coli ZH063 |
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Putative Escherichia coli ZH063 RM systems
Ref: Johnson,T.J. et al. unpublished
REBASE ref # 21218
| Sequence length: | GenBank #: | |
| Chromosome: | 5,033,359 bp | CP014522 |
| plasmid pZH063_1: | 114,223 bp | CP014523 |
| plasmid pZH063_2: | 49,467 bp | CP014524 |
REBASE acronym: Eco63
Org_num: 18339
All begin AVR76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1510 | 156 aa hypothetical protein | |||
| 1515 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco63ORF1520P |
| 1520 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco63ORF1520P |
| 1525 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco63ORF1520P |
| 1530 | 267 aa hypothetical protein | |||
| 24365 | 165 aa hypothetical protein | |||
| 24370 | R | EcoW004ORF18655P (100% identity) | Eco63ORF24385P | |
| 24375 | 397 aa hypothetical protein | |||
| 24380 | S | S.EcoW004ORF18655P (100% identity) | S.Eco63ORF24385P | |
| 24385 | M | M.EcoW004ORF18655P (100% identity) | M.Eco63ORF24385P | |
| 24390 | molecular chaperone Tir | |||
| 24750 | 237 aa hypothetical protein | |||
| 24755 | R | EcoZ247ORF19790P (100% identity) | Eco63ORF24765P | |
| 24760 | S | S.EcoZ247ORF19790P (100% identity) | S.Eco63ORF24765P | |
| 24765 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco63ORF24765P | |
| 24770 | 699 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5075 | 71 aa hypothetical protein | |||
| 5080 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco63ORF5080P | |
| 5085 | XRE family transcriptional regulator | |||
| 10035 | holin | |||
| 10055 | M | M.SflJ17BORF23540P (100% identity) | A | M.Eco63ORF10055P |
| 10060 | TrmB family transcriptional regulator | |||
| 10915 | drug/metabolite exporter YedA | |||
| 10920 | V | V.SflC32DcmP (74% identity) | V.Eco63DcmP | |
| 10925 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco63DcmP |
| 10930 | hydrolase | |||
| 18520 | Fis family transcriptional regulator | |||
| 18525 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco63ORF18525P |
| 18530 | 59 aa hypothetical protein | |||
| 19130 | ribulose phosphate epimerase | |||
| 19135 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco63DamP |
| 19140 | cell division protein DamX | |||
| 20680 | DNA repair protein | |||
| 20685 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco63ORF20685P |
| 20690 | alkaline phosphatase | |||
| plasmid pZH063_1 | ||||
| 25420 | 73 aa hypothetical protein | |||
| 25425 | M | M.Sfl0030ORFCP (100% identity) | M.Eco63ORF25425P | |
| 25430 | 103 aa hypothetical protein | |||
| plasmid pZH063_2 | ||||
| 25830 | transposase | |||
| 25835 | R | YpsR1ORFAP (99% identity) | CCWGG | Eco63ORF25840P |
| 25840 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Eco63ORF25840P |
| 25845 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24765 | restriction endonuclease subunit M | |||
| 24770 | R | EcoW004GmrDP (100% identity) | Eco63GmrDP | |
| 24775 | cell filamentation protein Fic | |||