Escherichia coli SaT040 |
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Putative Escherichia coli SaT040 RM systems
Ref: Johnson,J.R. et al. unpublished
REBASE ref # 21680
| Sequence length: | GenBank #: | |
| Chromosome: | 5,061,821 bp | CP014495 |
| plasmid pSaT040: | 114,223 bp | CP014496 |
REBASE acronym: EcoT040
Org_num: 18332
All begin AVR72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1510 | 156 aa hypothetical protein | |||
| 1515 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoT040ORF1520P |
| 1520 | M | M.EcosS9ORF4930P (99% identity) | AAAGNNNNGTT | M.EcoT040ORF1520P |
| 1525 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoT040ORF1520P |
| 1530 | 0 aa hypothetical protein | |||
| 24585 | 165 aa hypothetical protein | |||
| 24590 | R | EcoW004ORF18655P (100% identity) | EcoT040ORF24605P | |
| 24595 | 397 aa hypothetical protein | |||
| 24600 | S | S.EcoW004ORF18655P (100% identity) | S.EcoT040ORF24605P | |
| 24605 | M | M.EcoW004ORF18655P (100% identity) | M.EcoT040ORF24605P | |
| 24610 | molecular chaperone Tir | |||
| 24955 | 237 aa hypothetical protein | |||
| 24960 | R | EcoZ247ORF19790P (100% identity) | EcoT040ORF24970P | |
| 24965 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoT040ORF24970P | |
| 24970 | M | M.EcoZ247ORF19790P (100% identity) | M.EcoT040ORF24970P | |
| 24975 | 699 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5285 | 71 aa hypothetical protein | |||
| 5290 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoT040ORF5290P | |
| 5295 | XRE family transcriptional regulator | |||
| 11065 | drug/metabolite exporter YedA | |||
| 11070 | V | V.SflC32DcmP (74% identity) | V.EcoT040DcmP | |
| 11075 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoT040DcmP |
| 11080 | hydrolase | |||
| 14855 | integrase | |||
| ??? | M | M.EcoKW01ORF6085P (100% identity) | M.EcoT040ORF14860P | |
| 14865 | 583 aa hypothetical protein | |||
| 18810 | Fis family transcriptional regulator | |||
| 18815 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoT040ORF18815P |
| 18820 | 59 aa hypothetical protein | |||
| 19420 | ribulose phosphate epimerase | |||
| 19425 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoT040DamP |
| 19430 | cell division protein DamX | |||
| plasmid pSaT040 | ||||
| 25820 | 73 aa hypothetical protein | |||
| 25825 | M | M.Sfl0030ORFCP (100% identity) | M.EcoT040ORF25825P | |
| 25830 | 103 aa hypothetical protein | |||