Escherichia coli UCD-JA30 |
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Putative Escherichia coli UCD-JA30 RM systems
Ref: Coil,D.A. et al. unpublished
REBASE ref # 21259
Contig set: 5,117,610 bp
GenBank #: LJYA00000000 (NZ_LJYA00000000)
REBASE acronym: EcoJA30
Org_num: 18047
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13 | 73 aa conserved hypothetical protein; KpLE2 phage-like element | |||
| 14 | M | M.SenSI170ORF3660P (100% identity) | M.EcoJA30ORFBP | |
| 15 | 386 aa hypothetical protein | |||
| 16 | S | S2.SenSI170ORF3660P (100% identity) | S.EcoJA30ORFBP | |
| 17 | 61 aa hypothetical protein | |||
| 18 | R | EcoM718ORFDP (100% identity) | EcoJA30ORFBP | |
| 20 | 66 aa hypothetical protein | |||
| 192 | 369 aa hypothetical protein | |||
| ??? | M | M.EcoS165ORF17585P (100% identity) | M.EcoJA30ORFCP | |
| 197 | S | S.Ecost88ORF20845P (100% identity) | S.EcoJA30ORFCP | |
| 200 | R | Ecost88ORF20845P (100% identity) | EcoJA30ORFCP | |
| 204 | 112 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19 | 81 aa hypothetical protein ECP_4573 | |||
| 20 | M | M.Mxa6833447ORFBP (100% identity) | M.EcoJA30ORFFP | |
| 21 | ATPase | |||
| 37 | 90 aa hypothetical protein | |||
| 38 | M | M.EcoPnTigORFFP (100% identity) | M.EcoJA30ORFEP | |
| 39 | 75 aa hypothetical protein | |||
| 88 | 81 aa hypothetical protein | |||
| 91 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.EcoJA30ORFDP |
| 95 | unnamed protein product | |||
| 168 | hydrolase | |||
| 170 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoJA30DcmP |
| ??? | V | V.SflC32DcmP (74% identity) | V.EcoJA30DcmP | |
| 176 | multidrug DMT transporter | |||
| 553 | DNA-binding protein fis | |||
| 555 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoJA30ORFAP |
| 557 | membrane protein | |||
| 1084 | cell division protein DamX | |||
| 1087 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA30DamP |
| 1089 | ribulose-phosphate 3-epimerase | |||