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Putative Cyanothece species PCC 7424 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10856
Sequence length: | GenBank #: | |
Chromosome: | 5,942,652 bp | CP001291 (NC_011729) |
plasmid pP742402: | 197,705 bp | CP001293 (NC_011737) |
REBASE acronym: Csp7424
Org_num: 5258
All begin PCC7424_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
971 | transcriptional regulator, MerR family | |||
972 | M | M.Gth3921I (57% identity) | M.Csp7424ORF972P | |
973 | S | Efa1981ORF9125P (12% identity) | S.Csp7424ORF972P | |
974 | 241 aa hypothetical protein | |||
2085 | N-6 DNA methylase | |||
2086 | S | S.Bth9NORF720P (19% identity) | S.Csp7424ORF2087P | |
2087 | M | M.Csp7822ORF4712P (53% identity) | M.Csp7424ORF2087P | |
2088 | R | Csp8801ORF2989P (55% identity) | Csp7424ORF2087P | |
2089 | Peptidase M23 | |||
3909 | 125 aa conserved hypothetical protein | |||
3910 | M | M.PspRG53ORF2319P (38% identity) | M.Csp7424ORF3910P | |
3911 | transposase ISAs1 family protein | |||
4138 | transposase | |||
4139 | S | S.PbaE1PORF19790P (33% identity) | S.Csp7424ORF4142P | |
4140 | 77 aa hypothetical protein | |||
4141 | 75 aa conserved hypothetical protein | |||
4142 | M | M.Mpa1757I (83% identity) | M.Csp7424ORF4142P | |
4143 | 65 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1107 | lipoic acid synthetase | |||
1108 | M | M.NspNUC1ORF6504P (76% identity) | M.Csp7424ORF1108P | |
1109 | 53 aa hypothetical protein | |||
1832 | protein of unknown function DUF820 | |||
1833 | M | M.Osp6506ORF410004P (28% identity) | CCATGG | M.Csp7424ORF1833P |
1834 | R | Dsa8305ORF1067P (37% identity) | Csp7424ORF1833P | |
1835 | phosphoenolpyruvate synthase | |||
2027 | 161 aa conserved hypothetical protein | |||
2028 | M | M.Csp7822ORF2876P (73% identity) | GGCC | M.Csp7424ORF2028P |
2029 | protein of unknown function DUF820 | |||
2256 | ABC-1 domain protein | |||
2257 | M | M.Csp7822ORF418P (82% identity) | GCSGC | M.Csp7424ORF2257P |
2258 | peptidase U61 LD-carboxypeptidase A | |||
2694 | 353 aa conserved hypothetical protein | |||
2695 | M | M.Csp7822ORF247P (76% identity) | RGCGCY | M.Csp7424ORF2695P |
2696 | agmatinase | |||
2705 | DNA binding domain protein, excisionase family | |||
2706 | M | M.Nsp7524ORF1537P (77% identity) | GGTNACC | M.Csp7424ORF2706P |
2707 | R | Nsp7524ORF1537P (82% identity) | GGTNACC | Csp7424ORF2706P |
2708 | 173 aa conserved hypothetical protein | |||
3011 | FHA modulated glycosyl | |||
3012 | M | M.PamM71ORF9345P (77% identity) | CYCGRG | M.Csp7424ORF3012P |
3013 | R | PamM71ORF9345P (78% identity) | CYCGRG | Csp7424ORF3012P |
3014 | 160 aa hypothetical protein | |||
3050 | hopene-associated glycosyltransferase HpnB | |||
3051 | M | M.KstMBR1ORF6P (64% identity) | M.Csp7424ORF3051P | |
3052 | 324 aa hypothetical protein | |||
3259 | 123 aa hypothetical protein | |||
3260 | M | modification methylase NspV | TTCGAA | M.Csp7424ORF3260P |
3261 | photosystem II core protein PsbZ | |||
3529 | 5-oxoprolinase (ATP-hydrolyzing) | |||
??? | R | 162 aa hypothetical protein Nos7524_3148 | ATGCAT | Csp7424ORF3531P |
3531 | M | M.Nsp7524ORF3147P (75% identity) | ATGCAT | M.Csp7424ORF3531P |
3532 | Glutathione S-transferase domain protein | |||
3998 | 528 aa hypothetical protein | |||
3999 | M | M.Fsp1846ORFGP (50% identity) | GTMKAC | M.Csp7424ORF3999P |
4000 | SAM-dependent methyltransferase | |||
4005 | 125 aa conserved hypothetical protein | |||
4006 | M | M.Csp7822ORF992P (65% identity) | GATC | M.Csp7424ORF4006P |
4007 | dihydropteroate synthase | |||
4156 | Acireductone dioxygenase ARD | |||
4157 | M | M.Psp001ORF9080P (56% identity) | M.Csp7424ORF4157P | |
4158 | metallophosphoesterase | |||
4167 | NADH dehydrogenase (ubiquinone) 24 kDa subunit | |||
4168 | R | LinBM01ORF5260P (69% identity) | CGTACG | Csp7424ORF4169P |
4169 | M | M.CagORF2240P (60% identity) | CGTACG | M.Csp7424ORF4169P |
4170 | transcriptional acitvator, Baf family | |||
4191 | undecaprenol kinase | |||
4192 | M | M.Csp7822ORF809P (80% identity) | CCGG | M.Csp7424ORF4192P |
4193 | 471 aa conserved hypothetical protein | |||
4261 | 185 aa hypothetical protein | |||
4262 | M | M.Nsp926ORF17650P (63% identity) | CGATCG | M.Csp7424ORF4262P |
4263 | pseudogene | |||
4303 | protein of unknown function DUF820 | |||
4304 | M | M.Ocy1ORF2400P (69% identity) | CAGCTG | M.Csp7424ORF4304P |
4305 | 310 aa conserved hypothetical protein | |||
4449 | MscS Mechanosensitive ion channel | |||
4450 | M | M.Asp90ORF12329P (74% identity) | AGTACT | M.Csp7424ORF4450P |
4451 | R | Pag976ORF3278P (13% identity) | AGTACT | Csp7424ORF4450P |
4452 | Acetylornithine transaminase | |||
4786 | pentapeptide repeat protein | |||
4787 | M | M.Sto24ORF5490P (69% identity) | ACRYGT | M.Csp7424ORF4787P |
4788 | R | Osp6506ORF3730015P (76% identity) | ACRYGT | Csp7424ORF4787P |
4789 | 84 aa conserved hypothetical protein | |||
4961 | Spermine synthase | |||
4962 | M | M.Csp7507ORF613P (59% identity) | CTGCAG | M.Csp7424ORF4962P |
4963 | R | LfuKN01ORF1940P (22% identity) | CTGCAG | Csp7424ORF4962P |
4964 | 133 aa conserved hypothetical protein | |||
4973 | lipoprotein signal peptidase | |||
4974 | M | M.Csp7822ORF353P (41% identity) | CAGCTG | M.Csp7424ORF4974P |
4975 | 59 aa hypothetical protein | |||
5154 | acetylornithine and succinylornithine | |||
5155 | R | Hsp220ORF26800P (91% identity) | CCTNAGG | Csp7424ORF5156P |
5156 | M | M.Cbr22ORF9340P (72% identity) | CCTNAGG | M.Csp7424ORF5156P |
5157 | 247 aa conserved hypothetical protein | |||
plasmid pP742402 | ||||
5430 | 286 aa conserved hypothetical protein | |||
5431 | M | M.Csp7822ORF6833P (37% identity) | M.Csp7424ORF5431P | |
5432 | 74 aa conserved hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3933 | 39 aa hypothetical protein | |||
3934 | M | adenine specific DNA methylase Mod | M.Csp7424ORF3934P | |
3935 | 122 aa hypothetical protein |