Escherichia coli 36293 |
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Putative Escherichia coli 36293 RM systems
Ref: Delannoy,S. et al. Genome Announc 3 (4), e00852-15 (2015)
REBASE ref # 20298
Contig set: 5,458,904 bp
GenBank #: LDXC00000000 (NZ_LDXC00000000)
REBASE acronym: Eco36293
Org_num: 16925
All begin ABE89_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22750 | hydrolase | |||
| 22755 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco36293DcmP |
| 22760 | V | V.SflSTLE3DcmP (100% identity) | V.Eco36293DcmP | |
| 22765 | multidrug DMT transporter | |||
| 14400 | LexA family transcriptional regulator | |||
| 14405 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco36293ORF14405P |
| 14410 | 162 aa hypothetical protein | |||
| 4525 | ninB protein | |||
| 4530 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco36293ORF4530P |
| 4535 | protein ninE | |||
| 15715 | Shiga toxin subunit A | |||
| 15735 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco36293ORF15735P | |
| 15740 | TrmB family transcriptional regulator | |||
| 6485 | 73 aa hypothetical protein | |||
| 6490 | M | M.SenBR027ORFEP (100% identity) | M.Eco36293ORF6490P | |
| 6495 | 103 aa hypothetical protein | |||
| 14575 | holin | |||
| 14580 | M | M.EcoDEC9DORF4898P (100% identity) | M.Eco36293ORF14580P | |
| 14585 | phage protein | |||
| 6375 | 73 aa hypothetical protein | |||
| 6380 | M | M.EcoSCU204ORF26105P (100% identity) | M.Eco36293ORF6380P | |
| 6385 | pseudogene | |||
| 14620 | LexA family transcriptional regulator | |||
| 14625 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco36293ORF14625P |
| 14630 | 162 aa hypothetical protein | |||
| 27985 | 75 aa hypothetical protein | |||
| 27990 | M | M.EcoDEC9EORF3529P (100% identity) | GATC | M.Eco36293ORF27990P |
| 27995 | endonuclease | |||
| 7365 | 268 aa hypothetical protein | |||
| 7370 | M | M.EcoDEC9BORF4836P (98% identity) | M.Eco36293ORF7370P | |
| 7375 | 180 aa hypothetical protein | |||
| 14960 | Fis family transcriptional regulator | |||
| 14965 | M | M.EcoDEC9EORF4431P (100% identity) | ATGCAT | M.Eco36293ORF14965P |
| 14970 | 59 aa hypothetical protein | |||
| 17550 | alkaline phosphatase | |||
| 17555 | RM | EcoFP2ORF70P (100% identity) | Eco36293ORF17555P | |
| 17560 | DNA repair protein | |||
| 2705 | cell division protein DamX | |||
| 2710 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco36293DamP |
| 2715 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17835 | R | Eco8960ORF5810P (84% identity) | Eco36293ORF17850P | |
| 17840 | 63 aa hypothetical protein | |||
| 17845 | 59 aa hypothetical protein | |||
| 17850 | M | M.Eco8960ORF5810P (100% identity) | M.Eco36293ORF17850P | |
| 17855 | 132 aa hypothetical protein | |||