Escherichia coli SF-468 |
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Putative Escherichia coli SF-468 RM systems
Ref: Stephens,C.M. et al. unpublished
REBASE ref # 21004
| Sequence length: | GenBank #: | |
| Chromosome: | 5,142,799 bp | CP012625 |
| plasmid pSF-468-2: | 92,766 bp | CP012627 |
REBASE acronym: Eco468
Org_num: 16838
All begin AN206_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21965 | restriction endonuclease | |||
| 21970 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco468ORF21975P |
| 21975 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco468ORF21975P |
| 21980 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco468ORF21975P |
| 21985 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco468DamP |
| 1770 | ribulose phosphate epimerase | |||
| 2380 | 59 aa hypothetical protein | |||
| 2385 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco468ORF2385P |
| 2390 | Fis family transcriptional regulator | |||
| 6225 | 162 aa hypothetical protein | |||
| 6230 | M | M.Ecoppa1ORF22275P (100% identity) | GATC | M.Eco468ORF6230P |
| 6235 | LexA family transcriptional regulator | |||
| 7270 | 64 aa hypothetical protein | |||
| 7275 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Eco468ORF7275P |
| 7280 | transcriptional regulator | |||
| 10895 | hydrolase | |||
| 10900 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco468DcmP |
| 10905 | V | V.SflC32DcmP (74% identity) | V.Eco468DcmP | |
| 10910 | multidrug DMT transporter | |||
| 14225 | 75 aa hypothetical protein | |||
| 14245 | M | M.SboBSORF1444P (100% identity) | M.Eco468ORF14245P | |
| 14250 | TrmB family transcriptional regulator | |||
| 16855 | endonuclease | |||
| 16860 | M | M.Ecoppa1ORF11250P (100% identity) | GATC | M.Eco468ORF16860P |
| 16865 | 75 aa hypothetical protein | |||
| 18545 | LexA family transcriptional regulator | |||
| 18550 | M | M.EcosEC8ORF20220P (100% identity) | GATC | M.Eco468ORF18550P |
| 18555 | 162 aa hypothetical protein | |||
| 20235 | cruciferin | |||
| 20240 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco468ORF20240P |
| 20245 | 27 aa hypothetical protein | |||
| plasmid pSF-468-2 | ||||
| 27195 | 73 aa hypothetical protein | |||
| 27200 | M | M.SflC32ORFDP (100% identity) | M.Eco468ORF27200P | |
| 27205 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6425 | resolvase | |||
| 6430 | R | EspFAAGmrSDP (100% identity) | Eco468GmrSD2P | |
| 6435 | damage-inducible protein DinI | |||
| 21960 | GTP-binding protein | |||
| 21965 | R | EcosS1MrrP (100% identity) | Eco468MrrP | |
| 21970 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15110 | protein ninE | |||
| 15115 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco468ORF15115P |
| 15120 | 146 aa hypothetical protein | |||