Escherichia coli 5-172-05_S1_C1 |
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Putative Escherichia coli 5-172-05_S1_C1 RM systems
Ref: Silbergeld,E. et al. unpublished
REBASE ref # 19165
Contig set: 4,970,425 bp
GenBank #: JOQX00000000 (NZ_JOQX00000000)
REBASE acronym: Eco5172
Org_num: 16362
All begin AB07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3388 | 222 aa hypothetical protein | |||
| 3389 | R | SenHL21ORF19875P (98% identity) | GCCNNNNNCATC | Eco5172ORF3391P |
| 3390 | S | S.SenHL21ORF19875P (98% identity) | GCCNNNNNCATC | S.Eco5172ORF3391P |
| 3391 | M | M2.SenHL21ORF19875P (99% identity) | GCCNNNNNCATC | M2.Eco5172ORF3391P |
| 3392 | M | M1.Kva883ORF23325P (99% identity) | GCCNNNNNCATC | M1.Eco5172ORF3391P |
| 3393 | phage integrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4718 | 102 aa hypothetical protein | |||
| 4719 | M | M.Cfr354ORF22960P (99% identity) | GATC | M.Eco5172ORF4719P |
| 4720 | 72 aa hypothetical protein | |||
| 4077 | 54 aa hypothetical protein | |||
| 4078 | M | M.CspSL156ORF2430P (100% identity) | ATGCAT | M.Eco5172ORF4078P |
| 4079 | DNA-binding protein fis | |||
| 177 | prophage domain protein | |||
| 178 | M | M.Kqu5BL06ORF23340P (89% identity) | M.Eco5172ORF178P | |
| 179 | 71 aa hypothetical protein | |||
| 2693 | protein damX | |||
| 2694 | M | M.CspSL156DamP (100% identity) | GATC | M.Eco5172DamP |
| 2695 | ribulose-phosphate 3-epimerase | |||
| 1714 | 230 aa hypothetical protein | |||
| 1715 | M | M.Cfr77772ORF20310P (100% identity) | CCWGG | M.Eco5172ORF1715P |
| 1716 | V | V.CfrNIH4ORF12185P (100% identity) | V.Eco5172ORF1715P | |
| 1717 | 306 aa hypothetical protein | |||
| 777 | 50 aa hypothetical protein | |||
| 778 | M | M.EhoC309ORFIP (96% identity) | M.Eco5172ORF778P | |
| 779 | 72 aa hypothetical protein | |||