Salmonella enterica subsp. enterica serovar Agona 39.O.03 |
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Putative Salmonella enterica subsp. enterica serovar Agona 39.O.03 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,647,297 bp
GenBank #: CATV00000000 (NZ_CATV00000000)
REBASE acronym: Sen39O02
Org_num: 16243
All begin SA39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4022 | filamentation induced by cAMP protein Fic | |||
| 4023 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen39O02ORF4025P |
| 4024 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen39O02ORF4025P |
| 4025 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen39O02ORF4025P |
| 4026 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen39O02ORF4025P |
| 4027 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4502 | ribulose-phosphate 3-epimerase | |||
| 4503 | M | M.StyTDamP (100% identity) | GATC | M.Sen39O02DamP |
| 4504 | protein DamX | |||
| 2545 | DNA-binding protein Fis | |||
| 2546 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen39O02ORF2546P |
| 2547 | periplasmic protein | |||
| 4041 | 670 aa hypothetical protein | |||
| 4042 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen39O02ORF4042P |
| 4043 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32 | major facilitator superfamily MFS_1 | |||
| ??? | M | type III restriction-modification system StyLTI enzyme mod | CAGAG | M.Sen39O02ORFAP |
| 34 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen39O02ORFAP |
| 35 | cyanide-insensitive oxidase CioA | |||