Salmonella enterica subsp. enterica serovar Agona 15.H.03 |
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Putative Salmonella enterica subsp. enterica serovar Agona 15.H.03 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,751,967 bp
GenBank #: CATA00000000 (NZ_CATA00000000)
REBASE acronym: Sen15H03
Org_num: 16224
All begin SA15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3650 | protein TIR | |||
| 3651 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen15H03ORF3651P |
| 3652 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen15H03ORF3651P |
| 3653 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen15H03ORF3651P |
| 3654 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen15H03ORF3651P |
| 3655 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3634 | 97 aa hypothetical protein | |||
| 3635 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen15H03ORF3635P |
| 3636 | 670 aa hypothetical protein | |||
| 1735 | metal dependent phosphohydrolase | |||
| 1736 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen15H03DcmP |
| 1737 | V | very short patch repair protein | V.Sen15H03DcmP | |
| 1738 | carboxylate/amino acid/amine transporter | |||
| 4665 | ribulose-phosphate 3-epimerase | |||
| 4666 | M | DNA adenine methylase | GATC | M.Sen15H03DamP |
| 4667 | protein DamX | |||
| 2077 | periplasmic protein | |||
| 2078 | M | DNA methylase | ATGCAT | M.Sen15H03ORF2078P |
| 2079 | DNA-binding protein Fis | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 641 | major facilitator superfamily MFS_1 | |||
| 642 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen15H03ORF642P |
| 643 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen15H03ORF642P |
| 644 | cyanide-insensitive oxidase CioA | |||