Salmonella enterica subsp. enterica serovar Agona 41.E.09 |
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Putative Salmonella enterica subsp. enterica serovar Agona 41.E.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,736,795 bp
GenBank #: CASF00000000 (NZ_CASF00000000)
REBASE acronym: Sen41E09
Org_num: 16209
All begin SA41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1921 | protein TIR | |||
| 1922 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen41E09ORF1922P |
| 1923 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen41E09ORF1922P |
| 1924 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen41E09ORF1922P |
| 1925 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen41E09ORF1922P |
| 1926 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4297 | M | M.StyTDamP (100% identity) | GATC | M.Sen41E09DamP |
| 4298 | ribulose-phosphate 3-epimerase | |||
| 1905 | 97 aa hypothetical protein | |||
| 1906 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen41E09ORF1906P |
| 1907 | 670 aa hypothetical protein | |||
| 2872 | metal dependent phosphohydrolase | |||
| 2873 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen41E09DcmP |
| 2874 | V | V.StyUK1DcmP (100% identity) | V.Sen41E09DcmP | |
| 2875 | carboxylate/amino acid/amine transporter | |||
| 4620 | uncharacterized protein | |||
| 4621 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen41E09ORF4621P |
| 4622 | Gp51 family protein | |||
| 3917 | 113 aa hypothetical protein | |||
| 3918 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen41E09ORF3918P |
| 3919 | bacteriophage replication gene A | |||
| 3920 | 62 aa hypothetical protein | |||
| 3921 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen41E09ORF3921P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen41E09ORF3921P |
| 3923 | pbsx family phage portal protein | |||
| 662 | DNA-binding protein Fis | |||
| 663 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen41E09ORF663P |
| 664 | periplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4704 | major facilitator superfamily MFS_1 | |||
| 4705 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen41E09ORF4705P |
| 4706 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen41E09ORF4705P |
| 4707 | cyanide-insensitive oxidase CioA | |||