Salmonella enterica subsp. enterica serovar Agona 46.E.09 |
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Putative Salmonella enterica subsp. enterica serovar Agona 46.E.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,734,722 bp
GenBank #: CARZ00000000 (NZ_CARZ00000000)
REBASE acronym: Sen46E09
Org_num: 16206
All begin SA46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 996 | filamentation induced by cAMP protein Fic | |||
| 997 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen46E09ORF999P |
| 998 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen46E09ORF999P |
| 999 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen46E09ORF999P |
| 1000 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen46E09ORF999P |
| 1001 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3811 | metal dependent phosphohydrolase | |||
| 3812 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen46E09DcmP |
| 3813 | V | V.StyUK1DcmP (100% identity) | V.Sen46E09DcmP | |
| 3814 | carboxylate/amino acid/amine transporter | |||
| 4651 | ribulose-phosphate 3-epimerase | |||
| 4652 | M | M.StyTDamP (100% identity) | GATC | M.Sen46E09DamP |
| 4653 | protein DamX | |||
| 1063 | periplasmic protein | |||
| 1064 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen46E09ORF1064P |
| 1065 | DNA-binding protein Fis | |||
| 4692 | Gp51 family protein | |||
| 4693 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen46E09ORF4693P |
| 4694 | uncharacterized protein | |||
| 393 | 113 aa hypothetical protein | |||
| 394 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen46E09ORF394P |
| 395 | bacteriophage replication gene A | |||
| 396 | 62 aa hypothetical protein | |||
| 397 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen46E09ORF397P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen46E09ORF397P |
| 399 | pbsx family phage portal protein | |||
| 1015 | 670 aa hypothetical protein | |||
| 1016 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen46E09ORF1016P |
| 1017 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3650 | cyanide-insensitive oxidase CioA | |||
| 3651 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen46E09ORF3652P |
| 3652 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen46E09ORF3652P |
| 3653 | major facilitator superfamily MFS_1 | |||