Salmonella enterica subsp. enterica serovar Agona 51.E.09 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Agona 51.E.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,735,777 bp
GenBank #: CARW00000000 (NZ_CARW00000000)
REBASE acronym: Sen51E09
Org_num: 16205
All begin SA51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3033 | protein TIR | |||
| 3034 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen51E09ORF3034P |
| 3035 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen51E09ORF3034P |
| 3036 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen51E09ORF3034P |
| 3037 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen51E09ORF3034P |
| 3038 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4574 | M | M.StyTDamP (100% identity) | GATC | M.Sen51E09DamP |
| 4575 | ribulose-phosphate 3-epimerase | |||
| 3017 | 97 aa hypothetical protein | |||
| 3018 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen51E09ORF3018P |
| 3019 | 670 aa hypothetical protein | |||
| 3807 | metal dependent phosphohydrolase | |||
| 3808 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen51E09DcmP |
| 3809 | V | V.StyUK1DcmP (100% identity) | V.Sen51E09DcmP | |
| 3810 | carboxylate/amino acid/amine transporter | |||
| 1300 | periplasmic protein | |||
| 1301 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen51E09ORF1301P |
| 1302 | DNA-binding protein Fis | |||
| 4718 | Gp51 family protein | |||
| 4719 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen51E09ORF4719P |
| 4720 | uncharacterized protein | |||
| 400 | 113 aa hypothetical protein | |||
| 401 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen51E09ORF401P |
| 402 | bacteriophage replication gene A | |||
| 403 | 62 aa hypothetical protein | |||
| 404 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen51E09ORF404P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen51E09ORF404P |
| 406 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3529 | major facilitator superfamily MFS_1 | |||
| 3530 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen51E09ORF3530P |
| 3531 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen51E09ORF3530P |
| 3532 | cyanide-insensitive oxidase CioA | |||