Salmonella enterica subsp. enterica serovar Agona 61.O.08 |
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Putative Salmonella enterica subsp. enterica serovar Agona 61.O.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,709,838 bp
GenBank #: CARN00000000 (NZ_CARN00000000)
REBASE acronym: Sen61O08
Org_num: 16187
All begin SA61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3841 | protein TIR | |||
| 3842 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen61O08ORF3842P |
| 3843 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen61O08ORF3842P |
| 3844 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen61O08ORF3842P |
| 3845 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen61O08ORF3842P |
| 3846 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3825 | 97 aa hypothetical protein | |||
| 3826 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen61O08ORF3826P |
| 3827 | 670 aa hypothetical protein | |||
| 4510 | ribulose-phosphate 3-epimerase | |||
| 4511 | M | M.StyTDamP (100% identity) | GATC | M.Sen61O08DamP |
| 4512 | protein DamX | |||
| 2227 | periplasmic protein | |||
| 2228 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen61O08ORF2228P |
| 2229 | DNA-binding protein Fis | |||
| 174 | 113 aa hypothetical protein | |||
| 175 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen61O08ORF175P |
| 176 | bacteriophage replication gene A | |||
| 177 | 62 aa hypothetical protein | |||
| 178 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen61O08ORF178P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen61O08ORF178P |
| 180 | pbsx family phage portal protein | |||
| 1304 | carboxylate/amino acid/amine transporter | |||
| 1305 | V | V.StyUK1DcmP (100% identity) | V.Sen61O08DcmP | |
| 1306 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen61O08DcmP |
| 1307 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2541 | major facilitator superfamily MFS_1 | |||
| 2542 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen61O08ORF2542P |
| 2543 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen61O08ORF2542P |
| 2544 | cyanide-insensitive oxidase CioA | |||